RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 SEC14L3Q9UDX4 400 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 DNAJC13O75165 2243 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 EXPH5Q8NEV8 1989 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 ANKRD33BA6NCL7 494 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 ZNF195O14628 629 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 ANKRD28O15084 1053 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 HS6ST1O60243 411 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 PPM1BO75688 479 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 P04436 131 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 STSP08842 583 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 RNF224P0DH78 156 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 CDK9P50750 372 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 CLDN8P56748 225 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 NRG3P56975 720 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 PSG6Q00889 435 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 ELOAQ14241 798 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 RPS6KA2Q15349 733 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 HYAL4Q2M3T9 481 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 FGD2Q7Z6J4 655 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 WDR75Q8IWA0 830 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 LRRC34Q8IZ02 419 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 FAM13CQ8NE31 585 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 OR5M3Q8NGP4 307 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 HOXB13Q92826 284 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 HGDQ93099 445 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 OMA1Q96E52 524 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 ZBED6CLQ96FA7 236 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 SECISBP2Q96T21 854 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 TTTY12Q9BZ98 90 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 PLSCR2Q9NRY7 297 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 SIRT3Q9NTG7 399 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 ZNF446Q9NWS9 450 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 NOP53Q9NZM5 478 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 CNIH4Q9P003 139 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 ERRFI1Q9UJM3 462 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 OSGIN2Q9Y236 505 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 EIF3LQ9Y262 564 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 ZNF835Q9Y2P0 537 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 MYO7BQ6PIF6 2116 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 DOPEY1Q5JWR5 2465 aa14.03□□□□□ -0.16
SNRPA1-213ENST00000560856 SPTBN1Q01082 2364 aaKnown RBP14.02□□□□□ -0.16
SNRPA1-213ENST00000560856 LRRC3CA6NJW4 275 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 CAPN14A8MX76 684 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 HMGB1P1B2RPK0 211 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 HDAC3O15379 428 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 TSPAN2O60636 221 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 ERN1O75460 977 aaKnown RBP14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 EFNA1P20827 205 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 PRPS1L1P21108 318 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 HPCAL1P37235 193 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 MAP3K8P41279 467 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 HSPB3Q12988 150 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 MAD2L1Q13257 205 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 MLC1Q15049 377 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 PRAMEF20Q5VT98 475 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 BICRALQ6AI39 1079 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 OGFOD2Q6N063 350 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 BNC2Q6ZN30 1099 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 GK5Q6ZS86 529 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 FAM47EQ6ZV65 393 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 MAVSQ7Z434 540 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 SLC34A3Q8N130 599 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 OR4N2Q8NGD1 307 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 OR52N2Q8NGI0 321 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 ZDHHC11Q9H8X9 412 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 IL1RL2Q9HB29 575 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 TAS2R9Q9NYW1 312 aa14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 MARCOQ9UEW3 520 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.02□□□□□ -0.17
SNRPA1-213ENST00000560856 ASH1LQ9NR48 2969 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 WIPF3A6NGB9 483 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 TP53I11O14683 189 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 ZNHIT1O43257 154 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 COQ9O75208 318 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 UGT2B11O75310 529 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 TRIM3O75382 744 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 ALDOCP09972 364 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 LBPP18428 481 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 RPL3P39023 403 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 PTGDSP41222 190 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 CASP3P42574 277 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 TMED10P49755 219 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 MANFP55145 182 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 PPIAP62937 165 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 HSF1Q00613 529 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 EXOSC6Q5RKV6 272 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 CPTPQ5TA50 214 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 FNDC7Q5VTL7 733 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 TMEM81Q6P7N7 255 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 Q6ZPB1 254 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 NUP54Q7Z3B4 507 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 CAMKMTQ7Z624 323 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 TMEM251Q8N6I4 163 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 ZFP28Q8NHY6 868 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 PSMA8Q8TAA3 256 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 RNF138Q8WVD3 245 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 TMBIM1Q969X1 311 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 GIMAP5Q96F15 307 aa14.01□□□□□ -0.17
SNRPA1-213ENST00000560856 SLC35A4Q96G79 324 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms