RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 NIPSNAP1Q9BPW8 284 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 NPLQ9BXD5 320 aaPredicted RBP10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 ARRDC1-AS1Q9H2J1 176 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 CLDN16Q9Y5I7 305 aa10.15□□□□□ -0.78
SNRPA1-211ENST00000560433 GXYLT2A0PJZ3 443 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 FAM86C2PA6NEL3 165 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 SERPINB7O75635 380 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 TIAF1O95411 115 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 CBX7O95931 251 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 TCTE1Q5JU00 501 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 TCTN3Q6NUS6 607 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 VWA5B2Q8N398 1253 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 OR6T1Q8NGN1 323 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 GPR151Q8TDV0 419 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 RIT1Q92963 219 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 TSLPQ969D9 159 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 MOAP1Q96BY2 351 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 FEVQ99581 238 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 DUSP23Q9BVJ7 150 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 ACER3Q9NUN7 267 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 DNAAF2Q9NVR5 837 aaKnown RBP10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 C19orf53Q9UNZ5 99 aaPredicted RBP10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 NTNG1Q9Y2I2 539 aa10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 FAM32AQ9Y421 112 aaKnown RBP10.15□□□□□ -0.79
SNRPA1-211ENST00000560433 GADD45GO95257 159 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 SP9P0CG40 484 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 IL7RP16871 459 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 MYF6P23409 242 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 GABRA3P34903 492 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 ANGPT1Q15389 498 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 FAM214AQ32MH5 1076 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF311Q5JNZ3 666 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 FGD3Q5JSP0 725 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 CDC73Q6P1J9 531 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 TTC33Q6PID6 262 aaPredicted RBP10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 ARHGAP22Q7Z5H3 698 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 ZAR1Q86SH2 424 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 LAPTM4BQ86VI4 370 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 MEX3DQ86XN8 651 aaKnown RBP10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 GPR135Q8IZ08 494 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 CLIP4Q8N3C7 705 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 D2HGDHQ8N465 521 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 SLC5A8Q8N695 610 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF321PQ8N8H1 164 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 SLC38A9Q8NBW4 561 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 UBE2FQ969M7 185 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 GTPBP3Q969Y2 492 aaKnown RBP10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 ZC3H10Q96K80 434 aaKnown RBP10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF354BQ96LW1 612 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 PTCHD1Q96NR3 888 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 CD180Q99467 661 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 DPYSL5Q9BPU6 564 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 MESP1Q9BRJ9 268 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 PTGFRNQ9P2B2 879 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 IFT80Q9P2H3 777 aaPredicted RBP10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 CHST2Q9Y4C5 530 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 PCDHGB3Q9Y5G1 929 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 PCDHGA8Q9Y5G5 932 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 R4GN57 208 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 MN1Q10571 1320 aaPredicted RBP10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 TRBV4-1A0A0J9YWV2 114 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 PEX12O00623 359 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 ARHGAP33O14559 1287 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 PDE9AO76083 593 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 SLC35E2P0CK97 266 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 SMIM18P0DKX4 95 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 TPD52P55327 224 aaPredicted RBP10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 DAB2P98082 770 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 MEP1AQ16819 746 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 CCDC157Q569K6 752 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 ATAD3BQ5T9A4 648 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 KDM4DQ6B0I6 523 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 FAAH2Q6GMR7 532 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 TMEM71Q6P5X7 295 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 WDR74Q6RFH5 385 aaPredicted RBP10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 FRRS1Q6ZNA5 592 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 KRT73Q86Y46 540 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 SLC30A8Q8IWU4 369 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 GALNT12Q8IXK2 581 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 SAMD14Q8IZD0 417 aaPredicted RBP10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 NLGN4XQ8N0W4 816 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 MIPOL1Q8TD10 442 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 PHF10Q8WUB8 498 aaKnown RBP10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 SGCDQ92629 289 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 ZNF501Q96CX3 271 aaPredicted RBP10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 SLC41A2Q96JW4 573 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 OR6C1Q96RD1 312 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 PIP5K1AQ99755 562 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 CXorf21Q9HAI6 301 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 APMAPQ9HDC9 416 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 PNO1Q9NRX1 252 aaKnown RBP10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 KRT84Q9NSB2 600 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 ERVK-19Q9WJR5 959 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 ENPP4Q9Y6X5 453 aa10.14□□□□□ -0.79
SNRPA1-211ENST00000560433 LOC100130705A0A1B0GUX0 176 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 FITM1A5D6W6 292 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 CLDN4O14493 209 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 ADAMDEC1O15204 470 aa10.13□□□□□ -0.79
SNRPA1-211ENST00000560433 CTNSO60931 367 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms