RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 STK17BO94768 372 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 SERPINA1P01009 418 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 BCHEP06276 602 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 HEXBP07686 556 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 PSMA4P25789 261 aaKnown RBP10.46□□□□□ -0.74
USP3-218ENST00000560202 AQP1P29972 269 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 SLC7A1P30825 629 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 PGDP52209 483 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 FUT7Q11130 342 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 DUSP8Q13202 625 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 TMED1Q13445 227 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 MAPK11Q15759 364 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 INTS11Q5TA45 600 aaKnown RBP10.46□□□□□ -0.74
USP3-218ENST00000560202 REEP3Q6NUK4 255 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 FAM199XQ6PEV8 388 aaPredicted RBP10.46□□□□□ -0.74
USP3-218ENST00000560202 ZCCHC12Q6PEW1 402 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 CCDC80Q76M96 950 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 WDR53Q7Z5U6 358 aaPredicted RBP10.46□□□□□ -0.74
USP3-218ENST00000560202 TMEM151BQ8IW70 566 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 SLC44A2Q8IWA5 706 aaPredicted RBP10.46□□□□□ -0.74
USP3-218ENST00000560202 ADGRG5Q8IZF4 528 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 EID3Q8N140 333 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 METTL25Q8N6Q8 603 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 CDRT4Q8N9R6 151 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 SLC16A11Q8NCK7 471 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 GALNT6Q8NCL4 622 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 SLC9A6Q92581 669 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 SLCO4A1Q96BD0 722 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 DGCR14Q96DF8 476 aaKnown RBP10.46□□□□□ -0.74
USP3-218ENST00000560202 SPSB2Q99619 263 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 CNPPD1Q9BV87 410 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 OLAHQ9NV23 265 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 GALNT8Q9NY28 637 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 GPN3Q9UHW5 284 aaPredicted RBP10.46□□□□□ -0.74
USP3-218ENST00000560202 ANAPC2Q9UJX6 822 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 AURKCQ9UQB9 309 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 ERVK-19Q9WJR5 959 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 ANGPT4Q9Y264 503 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 AP4S1Q9Y587 144 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 PCDHGA8Q9Y5G5 932 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 PCDHGA3Q9Y5H0 932 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 KCNE3Q9Y6H6 103 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 V9GYQ6 96 aa10.46□□□□□ -0.74
USP3-218ENST00000560202 ZFHX2Q9C0A1 2572 aaPredicted RBP10.46□□□□□ -0.74
USP3-218ENST00000560202 TEX51A0A1B0GUA7 166 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 C9orf172C9J069 976 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 DYRK3O43781 588 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 SLC28A2O43868 658 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 BAG2O95816 211 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 AGR2O95994 175 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 NR2F1P10589 423 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 CEACAM1P13688 526 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 ANPEPP15144 967 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 SSTR4P31391 388 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 EMP2P54851 167 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 SESN3P58005 492 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 TARDBPQ13148 414 aaKnown RBP eCLIP10.45□□□□□ -0.74
USP3-218ENST00000560202 ELAVL1Q15717 326 aaKnown RBP10.45□□□□□ -0.74
USP3-218ENST00000560202 SYPL1Q16563 259 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 C3orf38Q5JPI3 329 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 EXOSC6Q5RKV6 272 aaKnown RBP10.45□□□□□ -0.74
USP3-218ENST00000560202 TMEM164Q5U3C3 297 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 ZNF517Q6ZMY9 492 aaPredicted RBP10.45□□□□□ -0.74
USP3-218ENST00000560202 GALNT10Q86SR1 603 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 CACTIN-AS1Q8N1I8 211 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 ANKFN1Q8N957 763 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 POP5Q969H6 163 aaKnown RBP10.45□□□□□ -0.74
USP3-218ENST00000560202 SLC35A4Q96G79 324 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 TMEM19Q96HH6 336 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 SENP5Q96HI0 755 aaPredicted RBP10.45□□□□□ -0.74
USP3-218ENST00000560202 BTBD9Q96Q07 612 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 WDR54Q9H977 334 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 NXT1Q9UKK6 140 aaKnown RBP10.45□□□□□ -0.74
USP3-218ENST00000560202 SAMD4AQ9UPU9 718 aaKnown RBP10.45□□□□□ -0.74
USP3-218ENST00000560202 SATB2Q9UPW6 733 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 ZNF451Q9Y4E5 1061 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 CLCA3PQ9Y6N3 262 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 ZNF292O60281 2723 aa10.45□□□□□ -0.74
USP3-218ENST00000560202 C9J4A7 227 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 M0QX08 132 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 PEX1O43933 1283 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 PRAMEF2O60811 474 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 ALOX12BO75342 701 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 PRKD3O94806 890 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 PGM3O95394 542 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 ALOX5P09917 674 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 ACP2P11117 423 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 SLC5A2P31639 672 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 MAP3K8P41279 467 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 EMDP50402 254 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 CRYBA2P53672 197 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 PCBP3P57721 371 aaKnown RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 FUT5Q11128 374 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 GNA13Q14344 377 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 DUSP5Q16690 384 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 CRB2Q5IJ48 1285 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 RPS26P11Q5JNZ5 115 aaPredicted RBP10.44□□□□□ -0.74
USP3-218ENST00000560202 TBCELQ5QJ74 424 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 ATAD3BQ5T9A4 648 aa10.44□□□□□ -0.74
USP3-218ENST00000560202 IRAK1BP1Q5VVH5 260 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms