RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 GAB3Q8WWW8 586 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 LMF1Q96S06 567 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 MINDY3Q9H8M7 445 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 IQGAP3Q86VI3 1631 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 SLC15A5A6NIM6 579 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 HLA-HP01893 362 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 FBLP22087 321 aaKnown RBP13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 IL13RA1P78552 427 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 HEPHL1Q6MZM0 1159 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 EPGNQ6UW88 154 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 SHFQ7M4L6 423 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 NUP43Q8NFH3 380 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR4E2Q8NGC2 313 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR10Q1Q8NGQ4 319 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 ELP4Q96EB1 424 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 MFFQ9GZY8 342 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 MAGIXQ9H6Y5 334 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 GMEB2Q9UKD1 530 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 CNTNAP4Q9C0A0 1308 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 MSTNO14793 375 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CT45A6P0DMU7 189 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CT45A5P0DMU8 189 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CT45A7P0DMV0 189 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CT45A8P0DMV1 189 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CT45A9P0DMV2 189 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CSKP41240 450 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CT45A2Q5DJT8 189 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CT45A1Q5HYN5 189 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 C10orf62Q5T681 223 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 KBTBD6Q86V97 674 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 REM2Q8IYK8 340 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 MS4A15Q8N5U1 240 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 ACBD7Q8N6N7 88 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CT45A3Q8NHU0 189 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CNIH3Q8TBE1 160 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 FAM173AQ9BQD7 235 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 EDDM13A0A1B0GTR0 161 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 NIPSNAP2O75323 286 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 NFYBP25208 207 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 GJA5P36382 358 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 BDKRB1P46663 353 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 FJX1Q86VR8 437 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 LSMEM2Q8N112 164 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 FAM109AQ8N4B1 249 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR8J3Q8NGG0 315 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 BPIFA2Q96DR5 249 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 SGTBQ96EQ0 304 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 SPATA31A6Q5VVP1 1343 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 A0A0D9SG52 128 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CNTN5O94779 1100 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 OLFM2O95897 454 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 FCER1GP30273 86 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 ETV6P41212 452 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 NXPE4Q6UWF7 544 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 GPR155Q7Z3F1 870 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR4F6Q8NGB9 312 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR52E2Q8NGJ4 325 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZNF461Q8TAF7 563 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 GTF2H4Q92759 462 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 MR1Q95460 341 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 ESAMQ96AP7 390 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CD244Q9BZW8 370 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 LIN28AQ9H9Z2 209 aaKnown RBP13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 IL26Q9NPH9 171 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 LIPT1Q9Y234 373 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 RAB3DO95716 219 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 SBK2P0C263 348 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 PRDX3P30048 256 aaKnown RBP13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 LRRC73Q5JTD7 316 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 PRAMEF19Q5SWL8 479 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR56B4Q8NH76 319 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 ADAMTS19Q8TE59 1207 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 TOMM40LQ969M1 308 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 FGGYQ96C11 551 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 FOXRED1Q96CU9 486 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 RPL10LQ96L21 214 aaKnown RBP13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 SH3BGRL2Q9UJC5 107 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 HSPE1-MOB4S4R3N1 261 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 A0A1W2PPW3 197 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CILPO75339 1184 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 GRPRP30550 384 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 DBPQ10586 325 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 DBX2Q6ZNG2 339 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 HMGB4Q8WW32 186 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 BCL7BQ9BQE9 202 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 CPNE5Q9HCH3 593 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 GOLT1BQ9Y3E0 138 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 RCCD1A6NED2 376 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 PRKACGP22612 351 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 NUDT1P36639 197 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 SF3A2Q15428 464 aaKnown RBP13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 SLX4IPQ5VYV7 408 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 ITPKCQ96DU7 683 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 MICU1Q9BPX6 476 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 FKRPQ9H9S5 495 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 POLLQ9UGP5 575 aa13.22□□□□□ -0.29
CSPG4P12-202ENST00000559989 FAM227AF5H4B4 570 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 P2RX6O15547 441 aa13.21□□□□□ -0.29
CSPG4P12-202ENST00000559989 HTRA2O43464 458 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms