RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 NNATQ16517 81 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 TBR1Q16650 682 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 MEP1AQ16819 746 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 TRMT5Q32P41 509 aaKnown RBP13.29□□□□□ -0.28
SMAD6-204ENST00000559931 LRIF1Q5T3J3 769 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 ABHD17BQ5VST6 288 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 FAM91A1Q658Y4 838 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 B3GNTL1Q67FW5 361 aaPredicted RBP13.29□□□□□ -0.28
SMAD6-204ENST00000559931 MFSD12Q6NUT3 480 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 ZCCHC12Q6PEW1 402 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 DLEU7Q6UYE1 221 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 C16orf47Q6ZP98 133 aaPredicted RBP13.29□□□□□ -0.28
SMAD6-204ENST00000559931 GPR155Q7Z3F1 870 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 RNF130Q86XS8 419 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 TAGAPQ8N103 731 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 CDRT4Q8N9R6 151 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 NUBPLQ8TB37 319 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 ADAMTS15Q8TE58 950 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 ZFP90Q8TF47 636 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 EXTL1Q92935 676 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 LRRC58Q96CX6 371 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 NEURL3Q96EH8 262 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 AURKBQ96GD4 344 aaPredicted RBP13.29□□□□□ -0.28
SMAD6-204ENST00000559931 LCORQ96JN0 433 aaPredicted RBP13.29□□□□□ -0.28
SMAD6-204ENST00000559931 CGREF1Q99674 301 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 ARHGAP9Q9BRR9 750 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 THUMPD3Q9BV44 507 aaKnown RBP13.29□□□□□ -0.28
SMAD6-204ENST00000559931 RAD21L1Q9H4I0 556 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 VAPAQ9P0L0 249 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 ABI3Q9P2A4 366 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 MYOTQ9UBF9 498 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 DTX4Q9Y2E6 619 aa13.29□□□□□ -0.28
SMAD6-204ENST00000559931 KMT2BQ9UMN6 2715 aaPredicted RBP13.28□□□□□ -0.28
SMAD6-204ENST00000559931 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 TTC36A6NLP5 189 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 OR2J2O76002 312 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 CBX6O95503 412 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 DRD5P21918 477 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 PPIBP23284 216 aaKnown RBP13.28□□□□□ -0.28
SMAD6-204ENST00000559931 PTPN6P29350 595 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 NRG3P56975 720 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 SOX8P57073 446 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 CORO7P57737 925 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 CRB2Q5IJ48 1285 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 ACER2Q5QJU3 275 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMAD6-204ENST00000559931 SAXO2Q658L1 398 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 H3F3CQ6NXT2 135 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 TNFAIP8L2Q6P589 184 aaPredicted RBP13.28□□□□□ -0.28
SMAD6-204ENST00000559931 ISLR2Q6UXK2 745 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 LINC00696Q6ZRV3 163 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 TMEM156Q8N614 296 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 FDCSPQ8NFU4 85 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 SLC22A8Q8TCC7 542 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 XAGE5Q8WWM1 108 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 PSMF1Q92530 271 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 ADIPOR1Q96A54 375 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 TP53INP1Q96A56 240 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 ROPN1LQ96C74 230 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 GIMAP5Q96F15 307 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 OTUB1Q96FW1 271 aaPredicted RBP13.28□□□□□ -0.28
SMAD6-204ENST00000559931 VSTM2LQ96N03 204 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 NXF5Q9H1B4 397 aaKnown RBP13.28□□□□□ -0.28
SMAD6-204ENST00000559931 PRORYQ9H606 182 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 Q9N2J8 555 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 GPATCH2Q9NW75 528 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 SLC25A37Q9NYZ2 338 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 GPR55Q9Y2T6 319 aaPredicted RBP13.28□□□□□ -0.28
SMAD6-204ENST00000559931 YARS2Q9Y2Z4 477 aaKnown RBP13.28□□□□□ -0.28
SMAD6-204ENST00000559931 PCDHGB3Q9Y5G1 929 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 LOC400499M0QZD8 3231 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 NBEAQ8NFP9 2946 aa13.28□□□□□ -0.28
SMAD6-204ENST00000559931 CNTRLQ7Z7A1 2325 aa13.27□□□□□ -0.28
SMAD6-204ENST00000559931 DUXAA6NLW8 204 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 B2RBV5 119 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 MKRN2OSH3BPM6 223 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 ITGA10O75578 1167 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 UBOX5O94941 541 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 SOX30O94993 753 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 UNC5CO95185 931 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 PSMG1O95456 288 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 C1QCP02747 245 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 ITGB2P05107 769 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 ALPPP05187 535 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 OR12D1P0DN82 309 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 ACP2P11117 423 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 KRT20P35900 424 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 RFX3P48380 749 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 KHKP50053 298 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 ST13P50502 369 aaKnown RBP13.27□□□□□ -0.29
SMAD6-204ENST00000559931 SSR4P51571 173 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 MLF1P58340 268 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 RUNDC3AQ59EK9 446 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 PIGGQ5H8A4 983 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 ATAD3BQ5T9A4 648 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 CDC73Q6P1J9 531 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 MSRB3Q8IXL7 192 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 COX18Q8N8Q8 333 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 SLC16A11Q8NCK7 471 aa13.27□□□□□ -0.29
SMAD6-204ENST00000559931 SNRNP27Q8WVK2 155 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms