RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 GOT2P00505 430 aaKnown RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 SERPINA3P01011 423 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 AGTP01019 485 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 MT-ND2P03891 347 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 FGF4P08620 206 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 AZU1P20160 251 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 HNF1AP20823 631 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 ACKR3P25106 362 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 SUCLG1P53597 346 aaKnown RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 RPS8P62241 208 aaKnown RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 NUCB2P80303 420 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 CYCSP99999 105 aaKnown RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 CDKL1Q00532 357 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 CSTF1Q05048 431 aaKnown RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 NCBP1Q09161 790 aaKnown RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 GRB14Q14449 540 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 ARHGAP19Q14CB8 494 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 FASTKD3Q14CZ7 662 aaKnown RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 SSX2Q16385 188 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 LRIT3Q3SXY7 679 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 ACSF3Q4G176 576 aaPredicted RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 PHYHD1Q5SRE7 291 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 PRAMEF20Q5VT98 475 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 LYPLAL1Q5VWZ2 237 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 PLPP4Q5VZY2 271 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 TCEAL6Q6IPX3 200 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 CAPN13Q6MZZ7 669 aaPredicted RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 BLOC1S2Q6QNY1 142 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 WASH2PQ6VEQ5 465 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 C17orf64Q86WR6 236 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 NBPF5PQ86XG9 351 aaPredicted RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 ZNF683Q8IZ20 524 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 LRRC75A-AS1Q8N1F1 130 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 ARL14Q8N4G2 192 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 NECAB1Q8N987 351 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 OR52K1Q8NGK4 314 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 OR8J1Q8NGP2 316 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 OR13C3Q8NGS6 347 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 OR2L2Q8NH16 312 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 RAET1EQ8TD07 263 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 MIPOL1Q8TD10 442 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 SPRYD4Q8WW59 207 aaPredicted RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 TCP11Q8WWU5 503 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 BPIFA2Q96DR5 249 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 C4orf45Q96LM5 186 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 DEFB118Q96PH6 123 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 TESK2Q96S53 571 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 SLC39A3Q9BRY0 314 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 GON7Q9BXV9 100 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 OR2B2Q9GZK3 357 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 FAM49AQ9H0Q0 323 aaPredicted RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 ZNF665Q9H7R5 613 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 PANK3Q9H999 370 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 AGPAT5Q9NUQ2 364 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 NUDT4Q9NZJ9 180 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 ZNF319Q9P2F9 582 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 MIOXQ9UGB7 285 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 PILRBQ9UKJ0 227 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 MAN1B1Q9UKM7 699 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 DIMT1Q9UNQ2 313 aaKnown RBP3.1□□□□□ -1.91
SPG11-218ENST00000559754 SATB2Q9UPW6 733 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 OR1A2Q9Y585 309 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 COLEC10Q9Y6Z7 277 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 MROH5Q6ZUA9 1318 aa3.1□□□□□ -1.91
SPG11-218ENST00000559754 LOC105371242A0A075B767 164 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 ARPC4-TTLL3A0A0A6YYG9 625 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 MEX3AA1L020 520 aaKnown RBP3.09□□□□□ -1.91
SPG11-218ENST00000559754 ASB14A6NK59 587 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 OR52A4PA6NMU1 304 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 NPIPA2E9PIF3 369 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 H3BTX0 84 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 ZNF195O14628 629 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 EPHB6O15197 1021 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 CTAGE5O15320 804 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 LCMT2O60294 686 aaKnown RBP3.09□□□□□ -1.91
SPG11-218ENST00000559754 JAK2O60674 1132 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 MAGEC1O60732 1142 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 GLRA3O75311 464 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 WBP4O75554 376 aaKnown RBP3.09□□□□□ -1.91
SPG11-218ENST00000559754 ANP32DO95626 131 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 UQCRFS1P1P0C7P4 283 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 ZSCAN5DPP0CG00 497 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 SLC2A3P11169 496 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 ANXA8P13928 327 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 NCF2P19878 526 aaPredicted RBP3.09□□□□□ -1.91
SPG11-218ENST00000559754 LHCGRP22888 699 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 PSMA2P25787 234 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 GRIA1P42261 906 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 LEPRP48357 1165 aaKnown RBP3.09□□□□□ -1.91
SPG11-218ENST00000559754 NPY2RP49146 381 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 PGFP49763 221 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 LIMK2P53671 638 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 PRMT2P55345 433 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 PPIAP62937 165 aaKnown RBP3.09□□□□□ -1.91
SPG11-218ENST00000559754 HERVK_113P63132 956 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 ERVK-8P63133 956 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 MYL7Q01449 175 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 NFATC2Q13469 925 aa3.09□□□□□ -1.91
SPG11-218ENST00000559754 EFTUD2Q15029 972 aaKnown RBP eCLIP3.09□□□□□ -1.91
SPG11-218ENST00000559754 HERC3Q15034 1050 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms