RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CLEC1AQ8NC01 280 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 ROPN1LQ96C74 230 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 NTNG2Q96CW9 530 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 RCN3Q96D15 328 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 ANKRD27Q96NW4 1050 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 CGREF1Q99674 301 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 SLC35A5Q9BS91 424 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 ITPAQ9BY32 194 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 IKZF5Q9H5V7 419 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 ZNF552Q9H707 407 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 TPT1P8Q9HAU6 139 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 DUSP22Q9NRW4 184 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 MYOTQ9UBF9 498 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 TAGLN3Q9UI15 199 aa13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 PCDHGA9Q9Y5G4 932 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-207ENST00000559309 CFAP46Q8IYW2 2715 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 FRG2CA6NGY1 282 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 CCT8L1PA6NM43 557 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 MRASO14807 208 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 ASNA1O43681 348 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 MAN1A2O60476 641 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 NME6O75414 186 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 SOX30O94993 753 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 UNC5CO95185 931 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 ACP2P11117 423 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 TRHRP34981 398 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 CPOXP36551 454 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 PSPHP78330 225 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 TBR1Q16650 682 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 PIGGQ5H8A4 983 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 C6orf163Q5TEZ5 329 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 HEPHL1Q6MZM0 1159 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 BHLHB9Q6PI77 547 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 ZNF621Q6ZSS3 439 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 DHDDSQ86SQ9 333 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 C10orf111Q8N326 155 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 SLC16A11Q8NCK7 471 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 OR5L2Q8NGL0 311 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 OR5AK3PQ8NH89 298 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 FAM110BQ8TC76 370 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 BRIX1Q8TDN6 353 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 RNF138Q8WVD3 245 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 APOBEC4Q8WW27 367 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 LRRC58Q96CX6 371 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 C16orf58Q96GQ5 468 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 THOC3Q96J01 351 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 STACQ99469 402 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 CPPED1Q9BRF8 314 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 ACTRT3Q9BYD9 372 aa13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 NXF5Q9H1B4 397 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-207ENST00000559309 TNRC6AQ8NDV7 1962 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 C2orf92A0A1B0GVN3 265 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 PRAMEF27A3QJZ7 478 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 ACOX3O15254 700 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 GUSBP08236 651 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 SLC6A2P23975 617 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 GZMMP51124 257 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 MAPK11Q15759 364 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 CRB2Q5IJ48 1285 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 C6orf10Q5SRN2 563 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 NANOGP8Q6NSW7 305 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 TCTN3Q6NUS6 607 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 SLC29A4Q7RTT9 530 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 RPS19BP1Q86WX3 136 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 SLC15A4Q8N697 577 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 PCYOX1LQ8NBM8 494 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 OR8J3Q8NGG0 315 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 OR52N2Q8NGI0 321 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 FBXO27Q8NI29 283 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 TTC9Q92623 222 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 HSPBAP1Q96EW2 488 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 AURKBQ96GD4 344 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 CRELD1Q96HD1 420 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 LCORQ96JN0 433 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 SMAD5Q99717 465 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 DEFB126Q9BYW3 111 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 RNF32Q9H0A6 362 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 PIGUQ9H490 435 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 NANOGQ9H9S0 305 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 EFCAB1Q9HAE3 211 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 BCAP29Q9UHQ4 241 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 SNX8Q9Y5X2 465 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 ATMQ13315 3056 aa13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 SPENQ96T58 3664 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-207ENST00000559309 CLIC1O00299 241 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 HMGN4O00479 90 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 TNFRSF21O75509 655 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 CBX6O95503 412 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 KRT75O95678 551 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 NAGAP17050 411 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 CALB2P22676 271 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 PPIBP23284 216 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 PRIM2P49643 509 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 CORO7P57737 925 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 CXADRP78310 365 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 FUT5Q11128 374 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 FADDQ13158 208 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 TP53BP2Q13625 1128 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 SELPLGQ14242 412 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 LASP1Q14847 261 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms