RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 BICRALQ6AI39 1079 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 RPUSD3Q6P087 351 aaKnown RBP10.53□□□□□ -0.72
SNX1-204ENST00000559061 GALNTL5Q7Z4T8 443 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 CYP4Z2PQ8N1L4 340 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 CISD2Q8N5K1 135 aaKnown RBP10.53□□□□□ -0.72
SNX1-204ENST00000559061 RNF138Q8WVD3 245 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 ASB15Q8WXK1 588 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 OR5P2Q8WZ92 322 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 MIB2Q96AX9 1013 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 OTUB1Q96FW1 271 aaPredicted RBP10.53□□□□□ -0.72
SNX1-204ENST00000559061 C16orf58Q96GQ5 468 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 MAGED4Q96JG8 741 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 LCORQ96JN0 433 aaPredicted RBP10.53□□□□□ -0.72
SNX1-204ENST00000559061 FRMD6Q96NE9 622 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 INPP5KQ9BT40 448 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.53□□□□□ -0.72
SNX1-204ENST00000559061 KLHL1Q9NR64 748 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 ASF1BQ9NVP2 202 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.53□□□□□ -0.72
SNX1-204ENST00000559061 FLRT3Q9NZU0 649 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 PCDHGB6Q9Y5F9 930 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 GXYLT2A0PJZ3 443 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 C17orf51A8MQB3 221 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 G3V3Y1 287 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 CDK2AP1O14519 115 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 TSPAN2O60636 221 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 UGT2B11O75310 529 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 ERN1O75460 977 aaKnown RBP10.52□□□□□ -0.73
SNX1-204ENST00000559061 ABCB1P08183 1280 aaPredicted RBP10.52□□□□□ -0.73
SNX1-204ENST00000559061 PLA2G2AP14555 144 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 RPL3P39023 403 aaKnown RBP10.52□□□□□ -0.73
SNX1-204ENST00000559061 KIR3DL1P43629 444 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 MAN2A2P49641 1150 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 TDGF1P3P51864 188 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 GPR85P60893 370 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 FOXO1Q12778 655 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 ZNF155Q12901 538 aaPredicted RBP10.52□□□□□ -0.73
SNX1-204ENST00000559061 GSTA3Q16772 222 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 SLC25A25Q6KCM7 469 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 MFSD12Q6NUT3 480 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 PRICKLE2Q7Z3G6 844 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 ZAR1Q86SH2 424 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 SIAH3Q8IW03 269 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 SULF2Q8IWU5 870 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 GPALPP1Q8IXQ4 340 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 TMEM156Q8N614 296 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 SLC15A4Q8N697 577 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 PSD4Q8NDX1 1056 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 OR5AK3PQ8NH89 298 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 ZFP28Q8NHY6 868 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 FBXO30Q8TB52 745 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 GRHL3Q8TE85 626 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 PAQR8Q8TEZ7 354 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 C10orf82Q8WW14 230 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 OMA1Q96E52 524 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 CCDC115Q96NT0 180 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 MS4A4EQ96PG1 132 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 NODALQ96S42 347 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 TMEM120AQ9BXJ8 343 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 RTN4RQ9BZR6 473 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 DDX18Q9NVP1 670 aaKnown RBP10.52□□□□□ -0.73
SNX1-204ENST00000559061 ZIM2Q9NZV7 527 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 PRODH2Q9UF12 536 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 NPFFR2Q9Y5X5 522 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 KCNE3Q9Y6H6 103 aa10.52□□□□□ -0.73
SNX1-204ENST00000559061 NINQ8N4C6 2090 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 LRRC3CA6NJW4 275 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 A8MVJ9 347 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 POLR3GO15318 223 aaPredicted RBP10.51□□□□□ -0.73
SNX1-204ENST00000559061 EMC8O43402 210 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 SLC28A2O43868 658 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 COQ9O75208 318 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 SLC22A3O75751 556 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 BCAS2O75934 225 aaPredicted RBP10.51□□□□□ -0.73
SNX1-204ENST00000559061 NKX2-2O95096 273 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 ZIC2O95409 532 aaPredicted RBP10.51□□□□□ -0.73
SNX1-204ENST00000559061 PGRP06401 933 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 CAPN3P20807 821 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 PIGAP37287 484 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 RFC3P40938 356 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 SEC24CP53992 1094 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 CLNS1AP54105 237 aaKnown RBP10.51□□□□□ -0.73
SNX1-204ENST00000559061 RPS26P62854 115 aaKnown RBP10.51□□□□□ -0.73
SNX1-204ENST00000559061 C19orf57Q0VDD7 668 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 RCAN2Q14206 197 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 IGFBP7Q16270 282 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 DUSP5Q16690 384 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 GTDC1Q4AE62 458 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 C6orf163Q5TEZ5 329 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 FNDC7Q5VTL7 733 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 OPN5Q6U736 354 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 RTL4Q6ZR62 310 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 ACAD11Q709F0 780 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.51□□□□□ -0.73
SNX1-204ENST00000559061 CHERPQ8IWX8 916 aaKnown RBP10.51□□□□□ -0.73
SNX1-204ENST00000559061 CPSF7Q8N684 471 aaKnown RBP10.51□□□□□ -0.73
SNX1-204ENST00000559061 GOLM1Q8NBJ4 401 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 SLC16A11Q8NCK7 471 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 NUP43Q8NFH3 380 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 OR5M3Q8NGP4 307 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms