RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 AKAP7Q9P0M2 348 aaPredicted RBP2.5□□□□□ -2.01
VPS13C-207ENST00000558919 CA5BQ9Y2D0 317 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 SNX5Q9Y5X3 404 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 C11orf98E9PRG8 122 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 CFLARO15519 480 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 RTN2O75298 545 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 GHRP10912 638 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 UGT1A6P19224 532 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 MUTP22033 750 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 IL2RGP31785 369 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 CASP3P42574 277 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 UCP2P55851 309 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 WNT4P56705 351 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 BNIP1Q12981 228 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 CLPPQ16740 277 aaPredicted RBP2.49□□□□□ -2.01
VPS13C-207ENST00000558919 IYDQ6PHW0 289 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 ZNF677Q86XU0 584 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 CEND1Q8N111 149 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 C14orf178Q8N769 122 aaPredicted RBP2.49□□□□□ -2.01
VPS13C-207ENST00000558919 PSMA8Q8TAA3 256 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 DLX4Q92988 240 aaPredicted RBP2.49□□□□□ -2.01
VPS13C-207ENST00000558919 PTP4A1Q93096 173 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 LHX4Q969G2 390 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 ZNF702PQ9H963 129 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 MIEF1Q9NQG6 463 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 STARD5Q9NSY2 213 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 PIGVQ9NUD9 493 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 PURGQ9UJV8 347 aaKnown RBP2.49□□□□□ -2.01
VPS13C-207ENST00000558919 KLHDC2Q9Y2U9 406 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 ZNF175Q9Y473 711 aa2.49□□□□□ -2.01
VPS13C-207ENST00000558919 A0A0J9YVX5 310 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 NME2P1O60361 137 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 FMO6PO60774 539 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 ATP6V1G1O75348 118 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 HSPB1P04792 205 aaKnown RBP2.48□□□□□ -2.01
VPS13C-207ENST00000558919 CD1EP15812 388 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 ZNF18P17022 549 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 NPY2RP49146 381 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 KRT83P78385 493 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 TSTA3Q13630 321 aaPredicted RBP2.48□□□□□ -2.01
VPS13C-207ENST00000558919 GLYR1Q49A26 553 aaPredicted RBP2.48□□□□□ -2.01
VPS13C-207ENST00000558919 LGSNQ5TDP6 509 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 PRR5LQ6MZQ0 368 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 TSEN54Q7Z6J9 526 aaKnown RBP2.48□□□□□ -2.01
VPS13C-207ENST00000558919 SERPINA12Q8IW75 414 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 GPR65Q8IYL9 337 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 CADM2Q8N3J6 435 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 MLKLQ8NB16 471 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 OR52J3Q8NH60 311 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 SETD7Q8WTS6 366 aaKnown RBP2.48□□□□□ -2.01
VPS13C-207ENST00000558919 TMEM37Q8WXS4 190 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 DESI2Q9BSY9 194 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 DPH7Q9BTV6 452 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 EXOSC3Q9NQT5 275 aaKnown RBP2.48□□□□□ -2.01
VPS13C-207ENST00000558919 ARGLU1Q9NWB6 273 aaPredicted RBP2.48□□□□□ -2.01
VPS13C-207ENST00000558919 RPS6KB2Q9UBS0 482 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 DHRS7Q9Y394 339 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 FLVCR1Q9Y5Y0 555 aa2.48□□□□□ -2.01
VPS13C-207ENST00000558919 RAD54L2Q9Y4B4 1467 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 TRBV7-9A0A0J9YWB2 115 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 NPIPA2E9PIF3 369 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.47□□□□□ -2.01
VPS13C-207ENST00000558919 IGLV1-47P01700 117 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 PRB2P02812 416 aaPredicted RBP2.47□□□□□ -2.01
VPS13C-207ENST00000558919 AREGP15514 252 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 IGHV1-2P23083 117 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 EIF4EBP2Q13542 120 aaPredicted RBP2.47□□□□□ -2.01
VPS13C-207ENST00000558919 ZNF530Q6P9A1 599 aaPredicted RBP2.47□□□□□ -2.01
VPS13C-207ENST00000558919 DPY19L2P2Q6ZN68 376 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 C10orf53Q8N6V4 93 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 C11orf24Q96F05 449 aaPredicted RBP2.47□□□□□ -2.01
VPS13C-207ENST00000558919 APOOQ9BUR5 198 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 NLNQ9BYT8 704 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 ALG9Q9H6U8 611 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 KCNMB3Q9NPA1 279 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 HPS4Q9NQG7 708 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 COMMD8Q9NX08 183 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 LHX3Q9UBR4 397 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 PDE10AQ9Y233 779 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 NPC1L1Q9UHC9 1359 aa2.47□□□□□ -2.01
VPS13C-207ENST00000558919 CHD4Q14839 1912 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 ARHGAP23Q9P227 1491 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 A0A1W2PRV1 198 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 BUB1O43683 1085 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 STAM2O75886 525 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 IGSF6O95976 241 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 ACTL6AO96019 429 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 CPN1P15169 458 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 PSMB1P20618 241 aaKnown RBP2.46□□□□□ -2.02
VPS13C-207ENST00000558919 CTNNA1P35221 906 aaKnown RBP2.46□□□□□ -2.02
VPS13C-207ENST00000558919 PITPNBP48739 271 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 SGSHP51688 502 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 EIF2B1Q14232 305 aaKnown RBP2.46□□□□□ -2.02
VPS13C-207ENST00000558919 PRR4Q16378 134 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 CAMK4Q16566 473 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 ZNF674Q2M3X9 581 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 MEDAGQ5VYS4 303 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 DMKNQ6E0U4 476 aaPredicted RBP2.46□□□□□ -2.02
VPS13C-207ENST00000558919 TFAP2EQ6VUC0 442 aa2.46□□□□□ -2.02
VPS13C-207ENST00000558919 ADGRD2Q7Z7M1 963 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms