RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 CPSF2Q9P2I0 782 aaKnown RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 ANKMY1Q9P2S6 941 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 MGAT4CQ9UBM8 478 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 NKX1-2Q9UD57 310 aaPredicted RBP3.97□□□□□ -1.77
SPG11-211ENST00000558561 TBK1Q9UHD2 729 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 STEAP1Q9UHE8 339 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 ZNF225Q9UK10 706 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 NTNG1Q9Y2I2 539 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 NAALAD2Q9Y3Q0 740 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 OARD1Q9Y530 152 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 CLDN16Q9Y5I7 305 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 AP1M2Q9Y6Q5 423 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 RELNP78509 3460 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 GTF3C1Q12789 2109 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 MYO7BQ6PIF6 2116 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 TENM4Q6N022 2769 aa3.97□□□□□ -1.77
SPG11-211ENST00000558561 NUP210LQ5VU65 1888 aa3.96□□□□□ -1.77
SPG11-211ENST00000558561 HELZ2Q9BYK8 2649 aaKnown RBP3.96□□□□□ -1.77
SPG11-211ENST00000558561 NUP214P35658 2090 aaPredicted RBP3.96□□□□□ -1.77
SPG11-211ENST00000558561 IGLV3-12A0A075B6K2 115 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 A0A096LPK6 155 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 IDSB3KWA1 339 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 C21orf140B9A014 251 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 OR7A17O14581 309 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 RIPK2O43353 540 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 SLC28A2O43868 658 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 CCNT2O60583 730 aaKnown RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 ZNF354AO60765 605 aaPredicted RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 B4GALT2O60909 372 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 NME6O75414 186 aaPredicted RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 PRKRAO75569 313 aaKnown RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 STK16O75716 305 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 CEACAM4O75871 244 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 MT-ND3P03897 115 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 RPN2P04844 631 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 ANXA5P08758 320 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 HIST1H2AGP0C0S8 130 aaPredicted RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 NHLRC4P0CG21 123 aaPredicted RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 RNF224P0DH78 156 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 C1GALT1C1LP0DN25 315 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 CHN1P15882 459 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 EGR1P18146 543 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 HIST1H2ADP20671 130 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 TYK2P29597 1187 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 PTGER1P34995 402 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 GGT5P36269 586 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 MAGEA12P43365 314 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 SLCO1A2P46721 670 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 DIO1P49895 249 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 ARSFP54793 590 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 EMP2P54851 167 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 CDH13P55290 713 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 SUMO2P61956 95 aaKnown RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 BTN3A2P78410 334 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 ABATP80404 500 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 ID2Q02363 134 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 CAV1Q03135 178 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 CKAP4Q07065 602 aaKnown RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 CHIT1Q13231 466 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 ESPL1Q14674 2120 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 SLMAPQ14BN4 828 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 PFKFB4Q16877 469 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 DEFB134Q4QY38 66 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 UNC50Q53HI1 259 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 TOR1AIP1Q5JTV8 583 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 TCHHL1Q5QJ38 904 aaPredicted RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 DCAF10Q5QP82 559 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 ARMC3Q5W041 872 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 SCIMPQ6UWF3 145 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 ZNF793Q6ZN11 406 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 LINC00696Q6ZRV3 163 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 ASB18Q6ZVZ8 466 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 RAPH1Q70E73 1250 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 TMPRSS11BQ86T26 416 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 SYVN1Q86TM6 617 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 ASPGQ86U10 573 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 C17orf64Q86WR6 236 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 APLFQ8IW19 511 aaPredicted RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 OR4N5Q8IXE1 308 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 CA13Q8N1Q1 262 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 KIF2BQ8N4N8 673 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 TEX9Q8N6V9 391 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 ZNF321PQ8N8H1 164 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 SNX31Q8N9S9 440 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 TTC29Q8NA56 475 aaPredicted RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 VPS37AQ8NEZ2 397 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 ABHD5Q8WTS1 349 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 PHF21BQ96EK2 531 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 WBP1Q96G27 269 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 THOC3Q96J01 351 aaKnown RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 IMMP1LQ96LU5 166 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 QRFPRQ96P65 431 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 CSF3RQ99062 836 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 PAFAH2Q99487 392 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 H2AFJQ9BTM1 129 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 FUT8Q9BYC5 575 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 WDR12Q9GZL7 423 aaKnown RBP3.96□□□□□ -1.78
SPG11-211ENST00000558561 VN1R1Q9GZP7 353 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 DERL2Q9GZP9 239 aa3.96□□□□□ -1.78
SPG11-211ENST00000558561 OR51B5Q9H339 312 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms