RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 RPS6KA2Q15349 733 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 NTRK2Q16620 822 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 SLC22A10Q63ZE4 541 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 ZNF324BQ6AW86 544 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-205ENST00000558428 CAMKMTQ7Z624 323 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 SLC34A3Q8N130 599 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 ARFGAP2Q8N6H7 521 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 POGLUT1Q8NBL1 392 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 NUP43Q8NFH3 380 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 OR10G3Q8NGC4 313 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 CEP70Q8NHQ1 597 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 ACTRT2Q8TDY3 377 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 PAQR8Q8TEZ7 354 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 OMA1Q96E52 524 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 OR52B2Q96RD2 323 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 SLX1AQ9BQ83 275 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 EQTNQ9NQ60 294 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 DEPPQ9NTK1 212 aa11.38□□□□□ -0.59
SMAD3-205ENST00000558428 GCN1Q92616 2671 aaKnown RBP11.38□□□□□ -0.59
SMAD3-205ENST00000558428 ZNF407Q9C0G0 2248 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 A0A0G2JMM0 328 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 A0A1W2PPB8 328 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 A0A1W2PRS3 328 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 KIR3DP1A8MWS1 328 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 ANKRD28O15084 1053 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 TO15178 435 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 CFLARO15519 480 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 EMC8O43402 210 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 PPM1BO75688 479 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 TGDSO95455 350 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 PSMG1O95456 288 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 ABCB1P08183 1280 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-205ENST00000558428 FREM3P0C091 2139 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 CT45A8P0DMV1 189 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 CT45A9P0DMV2 189 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 EDN3P14138 238 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 ZNF24P17028 368 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 NAGAP17050 411 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 MST1P26927 711 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 UQCRFS1P47985 274 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 RPP38P78345 283 aaKnown RBP11.37□□□□□ -0.59
SMAD3-205ENST00000558428 MRPL49Q13405 166 aaKnown RBP11.37□□□□□ -0.59
SMAD3-205ENST00000558428 ELOAQ14241 798 aaKnown RBP11.37□□□□□ -0.59
SMAD3-205ENST00000558428 ZNHIT3Q15649 155 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-205ENST00000558428 LSM12Q3MHD2 195 aaKnown RBP11.37□□□□□ -0.59
SMAD3-205ENST00000558428 CT45A2Q5DJT8 189 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 PRAMEF20Q5VT98 475 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 TMEM198Q66K66 360 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 OR4F3Q6IEY1 312 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 EPGNQ6UW88 154 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 NPSR1Q6W5P4 371 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 RGS9BPQ6ZS82 235 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 GK5Q6ZS86 529 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 ACAD11Q709F0 780 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 WDR53Q7Z5U6 358 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-205ENST00000558428 SLC44A2Q8IWA5 706 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-205ENST00000558428 FBXW8Q8N3Y1 598 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 OR2M7Q8NG81 312 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 OR5P2Q8WZ92 322 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 TMBIM1Q969X1 311 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 TESCQ96BS2 214 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 MARK4Q96L34 752 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 FAM173AQ9BQD7 235 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 C3orf14Q9HBI5 128 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 SH2D2AQ9NP31 389 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 SIRT3Q9NTG7 399 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-205ENST00000558428 CNIH4Q9P003 139 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 OR10H1Q9Y4A9 318 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 SNX8Q9Y5X2 465 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 CHCHD2Q9Y6H1 151 aaPredicted RBP11.37□□□□□ -0.59
SMAD3-205ENST00000558428 HIVEP3Q5T1R4 2406 aa11.37□□□□□ -0.59
SMAD3-205ENST00000558428 PINLYPA6NC86 204 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 ANKUB1A6NFN9 424 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 E9PBE3 544 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 NPIPA5E9PKD4 350 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 TFECO14948 347 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-205ENST00000558428 UBDO15205 165 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 POLR3GO15318 223 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-205ENST00000558428 REM1O75628 298 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 CBX6O95503 412 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 IDO1P14902 403 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 KRT20P35900 424 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 PIGAP37287 484 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 KIR3DL1P43629 444 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 DNASE1L1P49184 302 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 TDGF1P3P51864 188 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 AQP5P55064 265 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 UFM1P61960 85 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 PSPHP78330 225 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 PRR5P85299 388 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 PSG6Q00889 435 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 PLGLB1Q02325 96 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 DPY19L1Q2PZI1 675 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 SPANXN4Q5MJ08 99 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 ZFP62Q8NB50 900 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-205ENST00000558428 ST6GALNAC3Q8NDV1 305 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 OR8J2Q8NGG1 315 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 DIO2Q92813 273 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 FAM120BQ96EK7 910 aaKnown RBP11.36□□□□□ -0.59
SMAD3-205ENST00000558428 TEX37Q96LM6 180 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms