RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 EFR3AQ14156 821 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 SQLEQ14534 574 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 EXOSC7Q15024 291 aaKnown RBP12.64□□□□□ -0.39
SHMT2-234ENST00000557703 MAPKAPK3Q16644 382 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 SLC22A10Q63ZE4 541 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 ANKRD26P1Q6NSI1 321 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 NUP54Q7Z3B4 507 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 SLC34A3Q8N130 599 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 NUP43Q8NFH3 380 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 PAQR8Q8TEZ7 354 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 OR52E6Q96RD3 313 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 STACQ99469 402 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 BARD1Q99728 777 aaKnown RBP12.64□□□□□ -0.39
SHMT2-234ENST00000557703 EBF4Q9BQW3 602 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 FOLH1BQ9HBA9 442 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 DUSP22Q9NRW4 184 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 AGPAT4Q9NRZ5 378 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 PLA2G3Q9NZ20 509 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 NBASA2RRP1 2371 aa12.64□□□□□ -0.39
SHMT2-234ENST00000557703 OR6C70A6NIJ9 312 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 SLC22A2O15244 555 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 NME2P1O60361 137 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 PPM1BO75688 479 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 RASAL1O95294 804 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 NADKO95544 446 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-234ENST00000557703 ZCCHC18P0CG32 403 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 CT45A8P0DMV1 189 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 CT45A9P0DMV2 189 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 NME2P22392 152 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 UQCRC2P22695 453 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 ABCD3P28288 659 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 MAP3K8P41279 467 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 CD97P48960 835 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 TRPC1P48995 793 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 ANXA11P50995 505 aaKnown RBP12.63□□□□□ -0.39
SHMT2-234ENST00000557703 POLR2JP52435 117 aaKnown RBP12.63□□□□□ -0.39
SHMT2-234ENST00000557703 ARFIP2P53365 341 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 WNT3P56703 355 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 HBA1P69905 142 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 PSG6Q00889 435 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 RCAN2Q14206 197 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 DECR1Q16698 335 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 NADK2Q4G0N4 442 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 CT45A2Q5DJT8 189 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 SPANXN4Q5MJ08 99 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 TMEM198Q66K66 360 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 SPINK14Q6IE38 97 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 OR4F3Q6IEY1 312 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 IL20RBQ6UXL0 311 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 BNC2Q6ZN30 1099 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-234ENST00000557703 PSD4Q8NDX1 1056 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 OIT3Q8WWZ8 545 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 FAM120BQ96EK7 910 aaKnown RBP12.63□□□□□ -0.39
SHMT2-234ENST00000557703 ITPAQ9BY32 194 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 NXF5Q9H1B4 397 aaKnown RBP12.63□□□□□ -0.39
SHMT2-234ENST00000557703 SH2D2AQ9NP31 389 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 SIRT3Q9NTG7 399 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-234ENST00000557703 SACM1LQ9NTJ5 587 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 ZCCHC3Q9NUD5 404 aaKnown RBP12.63□□□□□ -0.39
SHMT2-234ENST00000557703 DCTN4Q9UJW0 460 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 FAF1Q9UNN5 650 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-234ENST00000557703 ZNF462Q96JM2 2506 aa12.63□□□□□ -0.39
SHMT2-234ENST00000557703 ASPDHA6ND91 283 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 TTLL8A6PVC2 850 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 MAN1A2O60476 641 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 OR6B1O95007 311 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 NKX2-2O95096 273 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 SNX4O95219 450 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 KCNH1O95259 989 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 C6orf47O95873 294 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 AK1P00568 194 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 P04436 131 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 GUSBP08236 651 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 CNR1P21554 472 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 KCNK10P57789 538 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 ZNF155Q12901 538 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-234ENST00000557703 DUSP8Q13202 625 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 SPDYE7PQ495Y7 208 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 EXOSC6Q5RKV6 272 aaKnown RBP12.62□□□□□ -0.39
SHMT2-234ENST00000557703 MFSD12Q6NUT3 480 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 BLOC1S3Q6QNY0 202 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 LYPD8Q6UX82 237 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 GK5Q6ZS86 529 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 PTRH1Q86Y79 214 aaKnown RBP12.62□□□□□ -0.39
SHMT2-234ENST00000557703 FBXW8Q8N3Y1 598 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 CPSF7Q8N684 471 aaKnown RBP12.62□□□□□ -0.39
SHMT2-234ENST00000557703 BCORP1Q8N888 145 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 Q8NA96 180 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 CATSPER1Q8NEC5 780 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 MIPOL1Q8TD10 442 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 TMCO6Q96DC7 493 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 SLC35A4Q96G79 324 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 ITCHQ96J02 903 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 TEX37Q96LM6 180 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 SIGLEC12Q96PQ1 595 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 PHF12Q96QT6 1004 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 FAM173AQ9BQD7 235 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 G6PC3Q9BUM1 346 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 ACTRT3Q9BYD9 372 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 THUMPD1Q9NXG2 353 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms