RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 AMIGO1Q86WK6 493 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 POGLUT1Q8NBL1 392 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 DNAJA4Q8WW22 397 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 MYLIPQ8WY64 445 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 ACOT12Q8WYK0 555 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 IL17FQ96PD4 163 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 DCLRE1CQ96SD1 692 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 ACAT2Q9BWD1 397 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 MS4A8Q9BY19 250 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 BTBD1Q9H0C5 482 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 OR2AG1Q9H205 316 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 RHBGQ9H310 441 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 NT5DC2Q9H857 520 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 KCNK12Q9HB15 430 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 FOLH1BQ9HBA9 442 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 CTPS2Q9NRF8 586 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 ASB6Q9NWX5 421 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 B3GNT2Q9NY97 397 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 IL36AQ9UHA7 158 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 DNMT3AQ9Y6K1 912 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 KIAA1549LQ6ZVL6 1849 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 SCN5AQ14524 2016 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 COL4A6Q14031 1691 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 A0A1W2PRU2 124 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 LILRB5O75023 590 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 TBX6O95947 436 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 BUD31P41223 144 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 ACSM1Q08AH1 577 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 CCDC85BQ15834 202 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 POM121L1PQ3SYA9 428 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 ADIPOR2Q86V24 386 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 C11orf74Q86VG3 221 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 C17orf64Q86WR6 236 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 C2orf73Q8N5S3 287 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 OR8D4Q8NGM9 314 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 AIF1LQ9BQI0 150 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 RNF32Q9H0A6 362 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 SLC28A3Q9HAS3 691 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 ATP13A2Q9NQ11 1180 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 MRPL39Q9NYK5 338 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 A0A087WUU8 490 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 SHISA3A0PJX4 238 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 FAM170BA6NMN3 283 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 PLOD3O60568 738 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 EFCAB14O75071 495 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 CTSLP07711 333 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 NNMTP40261 264 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 KHKP50053 298 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 CSTF1Q05048 431 aaKnown RBP11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 TSPAN31Q12999 210 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 PRICKLE2Q7Z3G6 844 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 NUDT13Q86X67 352 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 MEX3DQ86XN8 651 aaKnown RBP11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 C9orf62Q8N4C0 152 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF764Q96H86 408 aaPredicted RBP11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 CAMK1GQ96NX5 476 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 DHRS9Q9BPW9 319 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 TEX12Q9BXU0 123 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 BCL2L10Q9HD36 194 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 RNF186Q9NXI6 227 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 EXTL2Q9UBQ6 330 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 MAFFQ9ULX9 164 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 NCKAP1Q9Y2A7 1128 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 PRR23AA6NEV1 266 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 CD8B2A6NJW9 211 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 CASC3O15234 703 aaKnown RBP11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 RFPL3O75679 317 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 EPPINO95925 133 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 ALDH1A1P00352 501 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 FGBP02675 491 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 CD8BP10966 210 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 IFI30P13284 250 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 HK1P19367 917 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 KELP23276 732 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 UQCRC1P31930 480 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 TAS2R41P59536 307 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF155Q12901 538 aaPredicted RBP11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 GRIN2CQ14957 1233 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 MLC1Q15049 377 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 WDR45BQ5MNZ6 344 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF782Q6ZMW2 699 aaPredicted RBP11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 RASSF6Q6ZTQ3 369 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 OLIG3Q7RTU3 272 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 GHDCQ8N2G8 530 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 OR4F15Q8NGB8 312 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 OR8H1Q8NGG4 311 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 OR52N1Q8NH53 320 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 RAD51AP1Q96B01 352 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF558Q96NG5 402 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 SLC46A2Q9BY10 475 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 ZDHHC5Q9C0B5 715 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 PELI2Q9HAT8 420 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 ZCCHC3Q9NUD5 404 aaKnown RBP11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 SLC23A1Q9UHI7 598 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 PLAGL1Q9UM63 463 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 ING4Q9UNL4 249 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 ASF1AQ9Y294 204 aa11.12□□□□□ -0.63
VIPAS39-211ENST00000557658 C2orf92A0A1B0GVN3 265 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 TSC22D2O75157 780 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 ELK1P19419 428 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms