RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 ATP5J2P56134 94 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 CLDN18P56856 261 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 HMGCS1Q01581 520 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 DMTNQ08495 405 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 PDIA2Q13087 525 aaKnown RBP9.25□□□□□ -0.93
RDH11-210ENST00000557331 GANABQ14697 944 aaKnown RBP9.25□□□□□ -0.93
RDH11-210ENST00000557331 ZKSCAN8Q15776 578 aaPredicted RBP9.25□□□□□ -0.93
RDH11-210ENST00000557331 KCTD19Q17RG1 926 aaPredicted RBP9.25□□□□□ -0.93
RDH11-210ENST00000557331 HP1BP3Q5SSJ5 553 aaPredicted RBP9.25□□□□□ -0.93
RDH11-210ENST00000557331 BTLAQ7Z6A9 289 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 ISCA2Q86U28 154 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 EXOC3L1Q86VI1 746 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 GCNT2Q8N0V5 402 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 CNEP1R1Q8N9A8 125 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 WDSUB1Q8N9V3 476 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 FBXO36Q8NEA4 188 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 PPP1R14CQ8TAE6 165 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 PYROXD1Q8WU10 500 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 HGDQ93099 445 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 GTPBP3Q969Y2 492 aaKnown RBP9.25□□□□□ -0.93
RDH11-210ENST00000557331 OMA1Q96E52 524 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 TRMT61AQ96FX7 289 aaKnown RBP9.25□□□□□ -0.93
RDH11-210ENST00000557331 ZNF845Q96IR2 970 aaPredicted RBP9.25□□□□□ -0.93
RDH11-210ENST00000557331 COL21A1Q96P44 957 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 SORBS1Q9BX66 1292 aaKnown RBP9.25□□□□□ -0.93
RDH11-210ENST00000557331 ZNF717Q9BY31 904 aaPredicted RBP9.25□□□□□ -0.93
RDH11-210ENST00000557331 NXF5Q9H1B4 397 aaKnown RBP9.25□□□□□ -0.93
RDH11-210ENST00000557331 OR10A4Q9H209 315 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 SDHAF3Q9NRP4 125 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 NMRK1Q9NWW6 199 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 PPP2R2CQ9Y2T4 447 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 MTO1Q9Y2Z2 717 aaKnown RBP9.25□□□□□ -0.93
RDH11-210ENST00000557331 ACOT9Q9Y305 439 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 SNX8Q9Y5X2 465 aa9.25□□□□□ -0.93
RDH11-210ENST00000557331 FRG2CA6NGY1 282 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 SUPT3HB4E1H0 165 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 EIF3HO15372 352 aaKnown RBP eCLIP9.24□□□□□ -0.93
RDH11-210ENST00000557331 PHGDHO43175 533 aaKnown RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 TMPRSS11DO60235 418 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 SUPT3HO75486 399 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 EEDO75530 441 aaKnown RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 SEC31AO94979 1220 aaKnown RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 FESP07332 822 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 LTA4HP09960 611 aaKnown RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 TCP1P17987 556 aaKnown RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 S1PR1P21453 382 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 DPP4P27487 766 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 IDUAP35475 653 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 ALDH18A1P54886 795 aaKnown RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 DSCR4P56555 118 aaPredicted RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 RPS3AP61247 264 aaKnown RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 DR1Q01658 176 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 SLMAPQ14BN4 828 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 FAM83EQ2M2I3 478 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 GLYR1Q49A26 553 aaPredicted RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 GRTP1Q5TC63 336 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 HMBOX1Q6NT76 420 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 RAPH1Q70E73 1250 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 ANKMY2Q8IV38 441 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 SPATA6LQ8N4H0 392 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 TEX9Q8N6V9 391 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 ZNF611Q8N823 705 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 L3MBTL4Q8NA19 623 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 GFM2Q969S9 779 aaKnown RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 SLC35A4Q96G79 324 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 MARK4Q96L34 752 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 RBBP8Q99708 897 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 USB1Q9BQ65 265 aaKnown RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 G6PC3Q9BUM1 346 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 SHCBP1LQ9BZQ2 653 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 DDX47Q9H0S4 455 aaKnown RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 STMN4Q9H169 189 aaPredicted RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 ALG9Q9H6U8 611 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 PTGES2Q9H7Z7 377 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 NGBQ9NPG2 151 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 PAQR5Q9NXK6 330 aaPredicted RBP9.24□□□□□ -0.93
RDH11-210ENST00000557331 BCAP29Q9UHQ4 241 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 DKKL1Q9UK85 242 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 ADAM21Q9UKJ8 722 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 PROCRQ9UNN8 238 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 WIF1Q9Y5W5 379 aa9.24□□□□□ -0.93
RDH11-210ENST00000557331 HEATR5AQ86XA9 2040 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 UQCRHLA0A096LP55 91 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 PGRMC2O15173 223 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 SIAH2O43255 324 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 UGT2B11O75310 529 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 CLDN9O95484 217 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 TGM6O95932 706 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 SOX18P35713 384 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 PTGDSP41222 190 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 KIR2DL2P43627 348 aaPredicted RBP9.23□□□□□ -0.93
RDH11-210ENST00000557331 PNLIPRP2P54317 469 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 CPSF6Q16630 551 aaKnown RBP eCLIP9.23□□□□□ -0.93
RDH11-210ENST00000557331 PRICKLE4Q2TBC4 344 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 FBXO48Q5FWF7 155 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 CCNYL2Q5T2Q4 361 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 KLC3Q6P597 504 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 ZNF474Q6S9Z5 364 aaPredicted RBP9.23□□□□□ -0.93
RDH11-210ENST00000557331 SSX8Q7RTT4 187 aa9.23□□□□□ -0.93
RDH11-210ENST00000557331 HIPK1Q86Z02 1210 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms