RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 VPS39Q96JC1 886 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 PIMREGQ9BSJ6 248 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 PRRG4Q9BZD6 226 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 ROGDIQ9GZN7 287 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 STMN4Q9H169 189 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-220ENST00000557037 LMBRD1Q9NUN5 540 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 IKZF3Q9UKT9 509 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 ZNF337Q9Y3M9 751 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 SNX8Q9Y5X2 465 aa11.13□□□□□ -0.63
PSEN1-220ENST00000557037 GLOD5A6NK44 160 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 TRIM77I1YAP6 450 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 SAP18O00422 153 aaKnown RBP11.12□□□□□ -0.63
PSEN1-220ENST00000557037 ABCD4O14678 606 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 GPR75O95800 540 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 GNAZP19086 355 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 HIST1H1TP22492 207 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-220ENST00000557037 DEKP35659 375 aaKnown RBP11.12□□□□□ -0.63
PSEN1-220ENST00000557037 RBMXP38159 391 aaKnown RBP11.12□□□□□ -0.63
PSEN1-220ENST00000557037 GDF5P43026 501 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 PDLIM4P50479 330 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 TERF1P54274 439 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 CDKN2DP55273 166 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 HMGCS1Q01581 520 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 SLAMF1Q13291 335 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 BIKQ13323 160 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 SNTA1Q13424 505 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 DHX34Q14147 1143 aaKnown RBP11.12□□□□□ -0.63
PSEN1-220ENST00000557037 OASLQ15646 514 aaKnown RBP11.12□□□□□ -0.63
PSEN1-220ENST00000557037 SGCBQ16585 318 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 KCTD19Q17RG1 926 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-220ENST00000557037 AP5B1Q2VPB7 878 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 RAET1LQ5VY80 246 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 TMEM81Q6P7N7 255 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 STK32CQ86UX6 486 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 CCDC89Q8N998 374 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 HSD17B8Q92506 261 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 TANKQ92844 425 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 ZNF669Q96BR6 464 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-220ENST00000557037 NXNL1Q96CM4 212 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 FOXN4Q96NZ1 517 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 PELOQ9BRX2 385 aaKnown RBP11.12□□□□□ -0.63
PSEN1-220ENST00000557037 TBCDQ9BTW9 1192 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 OR10A5Q9H207 317 aa11.12□□□□□ -0.63
PSEN1-220ENST00000557037 ZNF490Q9ULM2 529 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-220ENST00000557037 A0A1W2PS29 197 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 LRP5LA4QPB2 252 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 B4DXG7 233 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 E7EQL1 145 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 H3BML4 177 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 LIASO43766 372 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 WDR47O94967 919 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 CT62P0C5K7 136 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 FCGR2AP12318 317 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 GPX3P22352 226 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 GSTM2P28161 218 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 SSR2P43308 183 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 BASP1P80723 227 aaKnown RBP11.11□□□□□ -0.63
PSEN1-220ENST00000557037 PLCXD2Q0VAA5 305 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 SNX1Q13596 522 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 RBM20Q5T481 1227 aaKnown RBP11.11□□□□□ -0.63
PSEN1-220ENST00000557037 DEPDC1Q5TB30 811 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 CCDC25Q86WR0 208 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 FBXL14Q8N1E6 418 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 ZNF615Q8N8J6 731 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 ZNF418Q8TF45 676 aaPredicted RBP11.11□□□□□ -0.63
PSEN1-220ENST00000557037 KCTD4Q8WVF5 259 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 GMPPAQ96IJ6 420 aaPredicted RBP11.11□□□□□ -0.63
PSEN1-220ENST00000557037 RBM4Q9BWF3 364 aaKnown RBP11.11□□□□□ -0.63
PSEN1-220ENST00000557037 NT5DC2Q9H857 520 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 FBXO34Q9NWN3 711 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 TAS2R13Q9NYV9 303 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 IFNKQ9P0W0 207 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 PAK5Q9P286 719 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 XPR1Q9UBH6 696 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 FBXO5Q9UKT4 447 aa11.11□□□□□ -0.63
PSEN1-220ENST00000557037 MRPS18CQ9Y3D5 142 aaKnown RBP11.11□□□□□ -0.63
PSEN1-220ENST00000557037 H7C417 338 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 SS18L1O75177 396 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-220ENST00000557037 GCM2O75603 506 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-220ENST00000557037 COL6A2P12110 1019 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 EPB42P16452 691 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 ZNF23P17027 643 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 NAGAP17050 411 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 HK1P19367 917 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 IL11P20809 199 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 FABP6P51161 128 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 HNRNPH2P55795 449 aaKnown RBP11.1□□□□□ -0.63
PSEN1-220ENST00000557037 IL2P60568 153 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 RPS3AP61247 264 aaKnown RBP11.1□□□□□ -0.63
PSEN1-220ENST00000557037 TNFRSF17Q02223 184 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 GPR180Q86V85 440 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 MUC15Q8N387 334 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 OR4K17Q8NGC6 315 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 C1orf54Q8WWF1 131 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 GFM2Q969S9 779 aaKnown RBP11.1□□□□□ -0.63
PSEN1-220ENST00000557037 EGFL8Q99944 293 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 DHRS9Q9BPW9 319 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 HDHD5Q9BXW7 423 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 CXorf21Q9HAI6 301 aa11.1□□□□□ -0.63
PSEN1-220ENST00000557037 ABHD10Q9NUJ1 306 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms