RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 SLC47A1Q96FL8 570 aa13.33□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PYURFQ96I23 114 aa13.33□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZNF285Q96NJ3 590 aa13.33□□□□□ -0.28
TRAPPC6B-206ENST00000556765 AMDHD1Q96NU7 426 aa13.33□□□□□ -0.28
TRAPPC6B-206ENST00000556765 EPS8L2Q9H6S3 715 aa13.33□□□□□ -0.28
TRAPPC6B-206ENST00000556765 C3orf14Q9HBI5 128 aa13.33□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ANKHQ9HCJ1 492 aa13.33□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SEMA5BQ9P283 1151 aa13.33□□□□□ -0.28
TRAPPC6B-206ENST00000556765 FBXW2Q9UKT8 454 aa13.33□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CES1P1Q9UKY3 287 aa13.33□□□□□ -0.28
TRAPPC6B-206ENST00000556765 RAB26Q9ULW5 256 aa13.33□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ATG4BQ9Y4P1 393 aa13.33□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SYNDIG1LA6NDD5 238 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 C4orf51C9J302 202 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 P2RX6O15547 441 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 GALR3O60755 368 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 TIPRLO75663 272 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SOX30O94993 753 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 B3GALT4O96024 378 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SERPINA1P01009 418 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 C9P02748 559 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 FHP07954 510 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ARAFP10398 606 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 GPC1P35052 558 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 NCBP2P52298 156 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MVDP53602 400 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 LIM2P55344 173 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 RAB38P57729 211 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 DSTNP60981 165 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 BIKQ13323 160 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 GK3PQ14409 553 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MYBPC3Q14896 1274 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PRTGQ2VWP7 1150 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SNAP47Q5SQN1 464 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PRAMEF8Q5VWM4 474 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PRAMEF7Q5VXH5 474 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 FRMPD2BQ6IN97 320 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 WDR74Q6RFH5 385 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CBLL1Q75N03 491 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MCATQ8IVS2 390 aaKnown RBP13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SVOPLQ8N434 492 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 LZICQ8WZA0 190 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 TANKQ92844 425 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SDCCAG3Q96C92 435 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CHID1Q9BWS9 393 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CXorf36Q9H7Y0 433 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 A4GALTQ9NPC4 353 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PDP2Q9P2J9 529 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ERVK-11Q9UQG0 969 aa13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MRPS33Q9Y291 106 aaKnown RBP13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MN1Q10571 1320 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC6B-206ENST00000556765 LOC105369274A0A096LPK9 316 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 A0A0G2JN53 185 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 LOC102723532A0A0G2JNH3 316 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ANKUB1A6NFN9 424 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 A8MU76 341 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 POLR1CO15160 346 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CLOCKO15516 846 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 EMC8O43402 210 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ASNA1O43681 348 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 DPM1O60762 260 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PRSS23O95084 383 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 AGR2O95994 175 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PVRP15151 417 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MAGEA2P43356 314 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 CCT3P49368 545 aaKnown RBP13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 KHKP50053 298 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 VSX2P58304 361 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 HSPB3Q12988 150 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SCARB2Q14108 478 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ADRM1Q16186 407 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 DEFB134Q4QY38 66 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 YOD1Q5VVQ6 348 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 LPCAT4Q643R3 524 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PPP4R4Q6NUP7 873 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 GDF7Q7Z4P5 450 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 PRSS42Q7Z5A4 293 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ARHGAP22Q7Z5H3 698 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 ZNF761Q86XN6 746 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 OR4N4Q8N0Y3 316 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 LRRC25Q8N386 305 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 AMER3Q8N944 861 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 TTC29Q8NA56 475 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 OR4K14Q8NGD5 310 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MIPOL1Q8TD10 442 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 RNF31Q96EP0 1072 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MVB12AQ96EY5 273 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SLC35G5Q96KT7 338 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 FCRL4Q96PJ5 515 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 NR1H4Q96RI1 486 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MAP3K3Q99759 626 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 MAPKAP1Q9BPZ7 522 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 GLIPR2Q9H4G4 154 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 SIRT3Q9NTG7 399 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 KCMF1Q9P0J7 381 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 DNAJB9Q9UBS3 223 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 BAG5Q9UL15 447 aa13.31□□□□□ -0.28
TRAPPC6B-206ENST00000556765 USP22Q9UPT9 525 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms