RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 POLR2EP19388 210 aaKnown RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 CD72P21854 359 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 RPS3P23396 243 aaKnown RBP eCLIP4.83□□□□□ -1.64
SRP54-211ENST00000556445 TIA1P31483 386 aaKnown RBP eCLIP4.83□□□□□ -1.64
SRP54-211ENST00000556445 CDAP32320 146 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 CDKN1AP38936 164 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 RGS4P49798 205 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 RPL14P50914 215 aaKnown RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 SGSHP51688 502 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 AQP5P55064 265 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 PSG6Q00889 435 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 TNFRSF17Q02223 184 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 FGFBP1Q14512 234 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 SQLEQ14534 574 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 IL13RA2Q14627 380 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 RNPS1Q15287 305 aaKnown RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 ZMYND11Q15326 602 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 DLG2Q15700 870 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 SRSF7Q16629 238 aaKnown RBP eCLIP4.83□□□□□ -1.64
SRP54-211ENST00000556445 AP5B1Q2VPB7 878 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 GPR33Q49SQ1 333 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 NADK2Q4G0N4 442 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 DNAL1Q4LDG9 190 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 SOWAHCQ53LP3 525 aaPredicted RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 FBXO48Q5FWF7 155 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 TECRLQ5HYJ1 363 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 CEP78Q5JTW2 689 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 SEL1L3Q68CR1 1132 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 BRAT1Q6PJG6 821 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 TPGS1Q6ZTW0 290 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 ASRGL1Q7L266 308 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 EFL1Q7Z2Z2 1120 aaKnown RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 PRSS42Q7Z5A4 293 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 TMCO2Q7Z6W1 182 aaPredicted RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 ADIPOR2Q86V24 386 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 BBS7Q8IWZ6 715 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 CENPLQ8N0S6 344 aaPredicted RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 L3MBTL4Q8NA19 623 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 STEAP2Q8NFT2 490 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 OR13C4Q8NGS5 318 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 STAG3L4Q8TBR4 150 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 HCAR2Q8TDS4 363 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 WBP2Q969T9 261 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 NXNL1Q96CM4 212 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 CMTM5Q96DZ9 223 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 DAZAP1Q96EP5 407 aaKnown RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 C11orf24Q96F05 449 aaPredicted RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 DTD2Q96FN9 168 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 THOC1Q96FV9 657 aaKnown RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 NAF1Q96HR8 494 aaKnown RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 ZNF641Q96N77 438 aaPredicted RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 LRRC3BQ96PB8 259 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 SNX18Q96RF0 628 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 SLC22A12Q96S37 553 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 LYSMD1Q96S90 227 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 ZBTB18Q99592 522 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 CDCA3Q99618 268 aaPredicted RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 SSX3Q99909 188 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 CCDC28BQ9BUN5 200 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 KATNB1Q9BVA0 655 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 DPCDQ9BVM2 203 aaPredicted RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 GATA5Q9BWX5 397 aaPredicted RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 BBS2Q9BXC9 721 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 DERL2Q9GZP9 239 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 CAB39LQ9H9S4 337 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 RNPEPL1Q9HAU8 725 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 SLC40A1Q9NP59 571 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 SPHK2Q9NRA0 654 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 NDE1Q9NXR1 346 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 IL17CQ9P0M4 197 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 RNF7Q9UBF6 113 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 KCNN3Q9UGI6 736 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 CLEC4AQ9UMR7 237 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 SNX7Q9UNH6 387 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 HS3ST2Q9Y278 367 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 STK38LQ9Y2H1 464 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 PPIL1Q9Y3C6 166 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 MAB21L2Q9Y586 359 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 ARL5AQ9Y689 179 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 MYLKQ15746 1914 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 A0A0J9YYE9 177 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 WASH3PC4AMC7 463 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 E5RI56 91 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 ANKRD65E5RJM6 399 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 H0Y8G0 127 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 PLK4O00444 970 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 PRMT5O14744 637 aaPredicted RBP4.82□□□□□ -1.64
SRP54-211ENST00000556445 GYG2O15488 501 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 ITM2AO43736 263 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 SSX5O60225 188 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 MGRN1O60291 552 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 SELENOFO60613 162 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 SCGB2A1O75556 95 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 PIGNO95427 931 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 CD160O95971 181 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 TRBC1P01850 177 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 HEXAP06865 529 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 GNAZP19086 355 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 AOC1P19801 751 aa4.82□□□□□ -1.64
SRP54-211ENST00000556445 IMPDH1P20839 514 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms