RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 CLLU1OSQ5K130 101 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CYB5D1Q6P9G0 228 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CNSTQ6PJW8 725 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 PLPPR4Q7Z2D5 763 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CCDC91Q7Z6B0 441 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 MAML2Q8IZL2 1156 aaPredicted RBP3.84□□□□□ -1.79
PRPF39-209ENST00000556353 LRRC43Q8N309 656 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CARNMT1Q8N4J0 409 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CCDC148Q8NFR7 591 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 OR4C15Q8NGM1 316 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 GOLGA5Q8TBA6 731 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 ACMSDQ8TDX5 336 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CTNNBL1Q8WYA6 563 aaPredicted RBP3.84□□□□□ -1.79
PRPF39-209ENST00000556353 SEPT1Q8WYJ6 367 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 ROBO4Q8WZ75 1007 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CNDP2Q96KP4 475 aaKnown RBP3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CCDC114Q96M63 670 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CWH43Q9H720 699 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 DNAJC4Q9NNZ3 241 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 HPF1Q9NWY4 346 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 GIMAP2Q9UG22 337 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 IL36AQ9UHA7 158 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 LAMP5Q9UJQ1 280 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CELA1Q9UNI1 258 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 CACNA1GO43497 2377 aa3.84□□□□□ -1.79
PRPF39-209ENST00000556353 KALRNO60229 2985 aa3.84□□□□□ -1.8
PRPF39-209ENST00000556353 ESYT2A0FGR8 921 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 MTMR11A4FU01 709 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 SYNDIG1LA6NDD5 238 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 SMCO2A6NFE2 343 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 LOC730098B7Z3J9 87 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 MSH4O15457 936 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 AP5Z1O43299 807 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 ZBTB14O43829 449 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 TSC22D2O75157 780 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 CSDE1O75534 798 aaKnown RBP3.83□□□□□ -1.8
PRPF39-209ENST00000556353 GFPT2O94808 682 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 SLCO2B1O94956 709 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 TDP2O95551 362 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 YEATS4O95619 227 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 FGFR1OPO95684 399 aaKnown RBP3.83□□□□□ -1.8
PRPF39-209ENST00000556353 PDGFBP01127 241 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-209ENST00000556353 CALM1P0DP23 149 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 CALM2P0DP24 149 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 CALM3P0DP25 149 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 SCG2P13521 617 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 EDNRAP25101 427 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 PKLRP30613 574 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 SFTPDP35247 375 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 KHKP50053 298 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 VCPP55072 806 aaKnown RBP3.83□□□□□ -1.8
PRPF39-209ENST00000556353 OR1D5P58170 312 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 C3AR1Q16581 482 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 UPP1Q16831 310 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 FAM106AQ4KMX7 169 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 HERC4Q5GLZ8 1057 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-209ENST00000556353 KDELC1Q6UW63 502 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 ANGPTL8Q6UXH0 198 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 BAIAP2L2Q6UXY1 529 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 IQCHQ86VS3 1027 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 ZBED8Q8IZ13 594 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 SLC22A15Q8IZD6 547 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 SPERTQ8NA61 448 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 COLGALT1Q8NBJ5 622 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 RHOXF1Q8NHV9 184 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 ERMNQ8TAM6 284 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 FBXO30Q8TB52 745 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 MGARPQ8TDB4 240 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 P2RX5Q93086 422 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 FAM122AQ96E09 287 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 NRBF2Q96F24 287 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 RBM14Q96PK6 669 aaKnown RBP3.83□□□□□ -1.8
PRPF39-209ENST00000556353 ADPGKQ9BRR6 497 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 VCX3BQ9H321 246 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 RABEP2Q9H5N1 569 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 ZNF302Q9NR11 478 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 RGS18Q9NS28 235 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 VPS54Q9P1Q0 977 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 WRAP73Q9P2S5 460 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-209ENST00000556353 NFKBIL1Q9UBC1 381 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-209ENST00000556353 GINS2Q9Y248 185 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 COL1A2P08123 1366 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 NUP210Q8TEM1 1887 aaPredicted RBP3.83□□□□□ -1.8
PRPF39-209ENST00000556353 PTPRDP23468 1912 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 GREB1Q4ZG55 1949 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 ANAPC1Q9H1A4 1944 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 FER1L5A0AVI2 2057 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 FAM208BQ5VWN6 2430 aa3.83□□□□□ -1.8
PRPF39-209ENST00000556353 FASNP49327 2511 aaKnown RBP3.83□□□□□ -1.8
PRPF39-209ENST00000556353 CFAP46Q8IYW2 2715 aa3.82□□□□□ -1.8
PRPF39-209ENST00000556353 GCN1Q92616 2671 aaKnown RBP3.82□□□□□ -1.8
PRPF39-209ENST00000556353 IGSF10Q6WRI0 2623 aa3.82□□□□□ -1.8
PRPF39-209ENST00000556353 CACNA1EQ15878 2313 aa3.82□□□□□ -1.8
PRPF39-209ENST00000556353 MYO18AQ92614 2054 aaKnown RBP3.82□□□□□ -1.8
PRPF39-209ENST00000556353 MYOFQ9NZM1 2061 aa3.82□□□□□ -1.8
PRPF39-209ENST00000556353 A0A087WZ39 114 aa3.82□□□□□ -1.8
PRPF39-209ENST00000556353 CHMP2AO43633 222 aa3.82□□□□□ -1.8
PRPF39-209ENST00000556353 SLC37A4O43826 429 aa3.82□□□□□ -1.8
PRPF39-209ENST00000556353 ZNF254O75437 659 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms