RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 MICAQ29983 383 aa9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 INTS6LQ5JSJ4 861 aaKnown RBP9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 OTUD1Q5VV17 481 aaPredicted RBP9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 Q6ZSR9 355 aa9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 PRSS35Q8N3Z0 413 aa9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 FBXO39Q8N4B4 442 aa9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 C19orf18Q8NEA5 215 aa9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 HRASLS5Q96KN8 279 aa9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 WDFY2Q96P53 400 aa9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 CDK15Q96Q40 435 aa9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 PITX2Q99697 317 aa9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 FSD1LQ9BXM9 530 aa9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 HEXA-AS1Q9H8Q6 139 aa9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 GALPQ9UBC7 116 aa9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 POLR3HQ9Y535 204 aaPredicted RBP9.81□□□□□ -0.84
EFCAB11-208ENST00000555872 IGKV6D-21A0A0A0MT36 114 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 A0A1W2PQL4 384 aaPredicted RBP9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 hCG_1807616A0A1W2PRN6 198 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 SLC35F4A4IF30 521 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 MPTX1A8MV57 137 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 M0R129 80 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 CACNG3O60359 315 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 LRG1P02750 347 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 STAG3L1P0CL83 205 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 SAGP10523 405 aaPredicted RBP9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 UROSP10746 265 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 PTGFRP43088 359 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ADPRHP54922 357 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 PAN2Q504Q3 1202 aaKnown RBP9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 CILP2Q8IUL8 1156 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 MSRB3Q8IXL7 192 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ATP6V1C2Q8NEY4 427 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 RAD9AQ99638 391 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 PTPN18Q99952 460 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ASB8Q9H765 288 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 PLSCR4Q9NRQ2 329 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 PRMT7Q9NVM4 692 aaPredicted RBP9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ING4Q9UNL4 249 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 NME7Q9Y5B8 376 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 SNX10Q9Y5X0 201 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 PCNTO95613 3336 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 LOC102723532A0A0G2JNH3 316 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 OR51F1A6NGY5 319 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 KRBOX1C9JBD0 128 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 H3BRB1 525 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ADAM12O43184 909 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 TSPAN3O60637 253 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 PRAMEF2O60811 474 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 WISP3O95389 354 aaPredicted RBP9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 TPOP07202 933 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 IGFBP1P08833 259 aaPredicted RBP9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 NR2F1P10589 423 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ZNF25P17030 456 aaPredicted RBP9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 SSTR2P30874 369 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 TLX1P31314 330 aaPredicted RBP9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 CXCR3P49682 368 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 PTGR1Q14914 329 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ZNF284Q2VY69 593 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 FAM174BQ3ZCQ3 159 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 FAM74A1Q5RGS3 127 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 PRAMEF19Q5SWL8 479 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 RIPPLY2Q5TAB7 128 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ACSM5Q6NUN0 579 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ZNF549Q6P9A3 640 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 KIAA0907Q7Z7F0 614 aaPredicted RBP9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ZNF605Q86T29 641 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 DENND6BQ8NEG7 585 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 OR52E4Q8NGH9 312 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 GPR152Q8TDT2 470 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 FAM120BQ96EK7 910 aaKnown RBP9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ZBED6CLQ96FA7 236 aaPredicted RBP9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 SFXN2Q96NB2 322 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ATOH8Q96SQ7 321 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 ATG101Q9BSB4 218 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 DPH7Q9BTV6 452 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 MIXL1Q9H2W2 232 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 PRM3Q9NNZ6 103 aa9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 RBFOX1Q9NWB1 397 aaKnown RBP9.8□□□□□ -0.84
EFCAB11-208ENST00000555872 SIP14410 1827 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 SMIM30A4D0T7 59 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 I6L893 689 aaPredicted RBP9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 ORC5O43913 435 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 SELENOFO60613 162 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 OR4F21O95013 312 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 ZFPL1O95159 310 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 PAK4O96013 591 aaPredicted RBP9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 NPSP0C0P6 89 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 RFC3P40938 356 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 SOX3P41225 446 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 MAGEA2P43356 314 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 ZNF157P51786 506 aaPredicted RBP9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 VLDLRP98155 873 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 SKP2Q13309 424 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 CAMK2DQ13557 499 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 TRIQKQ629K1 86 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 LRRC66Q68CR7 880 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 SPNS3Q6ZMD2 512 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 CHMP1BQ7LBR1 199 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 ZNF367Q7RTV3 350 aa9.79□□□□□ -0.84
EFCAB11-208ENST00000555872 SLC34A3Q8N130 599 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms