RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 OR2B11Q5JQS5 317 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 DDI2Q5TDH0 399 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 LRRC31Q6UY01 552 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 KLHDC8AQ8IYD2 350 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 MCOLN2Q8IZK6 566 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 TMEM61Q8N0U2 210 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 LSMEM1Q8N8F7 131 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 CCDC191Q8NCU4 936 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 NEIL3Q8TAT5 605 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 RDH5Q92781 318 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 MYDGFQ969H8 173 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 RAB3IPQ96QF0 476 aaPredicted RBP1.45□□□□□ -2.18
SRP54-207ENST00000555535 CPXM1Q96SM3 734 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 NTMT1Q9BV86 223 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 PTGES2Q9H7Z7 377 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 NKIRAS2Q9NYR9 191 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 STOX2Q9P2F5 926 aaPredicted RBP1.45□□□□□ -2.18
SRP54-207ENST00000555535 ANAPC5Q9UJX4 755 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 MRTO4Q9UKD2 239 aaKnown RBP1.45□□□□□ -2.18
SRP54-207ENST00000555535 DIMT1Q9UNQ2 313 aaKnown RBP1.45□□□□□ -2.18
SRP54-207ENST00000555535 PPIAL4AQ9Y536 164 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 PARD3Q8TEW0 1356 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 MTCL1Q9Y4B5 1905 aaKnown RBP1.44□□□□□ -2.18
SRP54-207ENST00000555535 SYNJ2O15056 1496 aa1.44□□□□□ -2.18
SRP54-207ENST00000555535 SERPINE3A8MV23 424 aa1.44□□□□□ -2.18
SRP54-207ENST00000555535 RAD51DO75771 328 aa1.44□□□□□ -2.18
SRP54-207ENST00000555535 SUPT7LO94864 414 aa1.44□□□□□ -2.18
SRP54-207ENST00000555535 SEMG1P04279 462 aa1.44□□□□□ -2.18
SRP54-207ENST00000555535 PTBP1P26599 531 aaKnown RBP eCLIP1.44□□□□□ -2.18
SRP54-207ENST00000555535 ACVR1BP36896 505 aa1.44□□□□□ -2.18
SRP54-207ENST00000555535 CTRLP40313 264 aa1.44□□□□□ -2.18
SRP54-207ENST00000555535 IL18R1Q13478 541 aa1.44□□□□□ -2.18
SRP54-207ENST00000555535 HKDC1Q2TB90 917 aa1.44□□□□□ -2.18
SRP54-207ENST00000555535 IGFL1Q6UW32 110 aa1.44□□□□□ -2.18
SRP54-207ENST00000555535 CXCL17Q6UXB2 119 aa1.44□□□□□ -2.18
SRP54-207ENST00000555535 UBTD2Q8WUN7 234 aa1.44□□□□□ -2.18
SRP54-207ENST00000555535 MRPL53Q96EL3 112 aaKnown RBP1.44□□□□□ -2.18
SRP54-207ENST00000555535 CNDP2Q96KP4 475 aaKnown RBP1.44□□□□□ -2.18
SRP54-207ENST00000555535 KIR2DS1A0A191URI9 304 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 SH2D1BO14796 132 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 CHRNGP07510 517 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 H2AFZP0C0S5 128 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 CYP3A5P20815 502 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 MAT2AP31153 395 aaKnown RBP1.43□□□□□ -2.18
SRP54-207ENST00000555535 GPC3P51654 580 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 METAP1P53582 386 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 NUP107P57740 925 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 KRTAP12-3P60328 96 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 PUDPQ08623 228 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 NFE2L1Q14494 772 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 KIR2DS1Q14954 304 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 TRADDQ15628 312 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 EPC2Q52LR7 807 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 LGSNQ5TDP6 509 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 SULT1C3Q6IMI6 304 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 ATRAIDQ6UW56 229 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 FRA10AC1Q70Z53 315 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 ZNF547Q8IVP9 402 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 DCUN1D4Q92564 292 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 CORO2AQ92828 525 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 C18orf25Q96B23 403 aaPredicted RBP1.43□□□□□ -2.18
SRP54-207ENST00000555535 DNAJA3Q96EY1 480 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 C11orf24Q96F05 449 aaPredicted RBP1.43□□□□□ -2.18
SRP54-207ENST00000555535 ERO1AQ96HE7 468 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 CDKN2AIPNLQ96HQ2 116 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 PARK7Q99497 189 aaKnown RBP1.43□□□□□ -2.18
SRP54-207ENST00000555535 CNPY3Q9BT09 278 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 DDX28Q9NUL7 540 aaKnown RBP1.43□□□□□ -2.18
SRP54-207ENST00000555535 TEKT2Q9UIF3 430 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 EXOC7Q9UPT5 735 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 SLC9A8Q9Y2E8 581 aa1.43□□□□□ -2.18
SRP54-207ENST00000555535 IGLV4-60A0A075B6I1 120 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 NPIPA5A0A0B4J1W7 369 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 LRRD1A4D1F6 860 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 FAM166BA8MTA8 275 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 NPIPA5E9PKD4 350 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 C11orf98E9PRG8 122 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 IFIT3O14879 490 aaKnown RBP1.42□□□□□ -2.18
SRP54-207ENST00000555535 EIF5BO60841 1220 aaKnown RBP1.42□□□□□ -2.18
SRP54-207ENST00000555535 ICOSLGO75144 302 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 LYPLA1O75608 230 aaPredicted RBP1.42□□□□□ -2.18
SRP54-207ENST00000555535 REC8O95072 547 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 GHRP10912 638 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 TBPP20226 339 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 MAGP20916 626 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 CDKL1Q00532 357 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 RPS6KA1Q15418 735 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 MPPE1Q53F39 396 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 LRRC38Q5VT99 294 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 ZNF57Q68EA5 555 aaPredicted RBP1.42□□□□□ -2.18
SRP54-207ENST00000555535 CAVIN1Q6NZI2 390 aaKnown RBP1.42□□□□□ -2.18
SRP54-207ENST00000555535 TMED8Q6PL24 325 aaPredicted RBP1.42□□□□□ -2.18
SRP54-207ENST00000555535 SLFN11Q7Z7L1 901 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 NHLRC2Q8NBF2 726 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 OR6M1Q8NGM8 313 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 RDH11Q8TC12 318 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 DEDD2Q8WXF8 326 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 TADA1Q96BN2 335 aa1.42□□□□□ -2.18
SRP54-207ENST00000555535 NOL4LQ96MY1 436 aaPredicted RBP1.42□□□□□ -2.18
SRP54-207ENST00000555535 MEPEQ9NQ76 525 aaPredicted RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms