RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 MAGEA8P43361 318 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 MAP1BP46821 2468 aaKnown RBP11.73□□□□□ -0.53
SYNE2-219ENST00000555323 MAN2A2P49641 1150 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 PRIM2P49643 509 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 PRKAG1P54619 331 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 ABHD17BQ5VST6 288 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 HLA-DQA1Q5Y7H0 255 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 CDC73Q6P1J9 531 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 LYPD8Q6UX82 237 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 RETREG3Q86VR2 466 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 HPS6Q86YV9 775 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 ZFP90Q8TF47 636 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 THAP3Q8WTV1 239 aaPredicted RBP11.73□□□□□ -0.53
SYNE2-219ENST00000555323 ABHD17AQ96GS6 310 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 RASL10BQ96S79 203 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 STACQ99469 402 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 SLC35A5Q9BS91 424 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 ITPAQ9BY32 194 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 ACTRT3Q9BYD9 372 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 NXF5Q9H1B4 397 aaKnown RBP11.73□□□□□ -0.53
SYNE2-219ENST00000555323 LIN28AQ9H9Z2 209 aaKnown RBP11.73□□□□□ -0.53
SYNE2-219ENST00000555323 SLC6A13Q9NSD5 602 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 RNF103-CHMP3A0A140T963 221 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 WWP2O00308 870 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 NME6O75414 186 aaPredicted RBP11.72□□□□□ -0.53
SYNE2-219ENST00000555323 OR2J2O76002 312 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 KCNH1O95259 989 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 ANP32DO95626 131 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 GSNP06396 782 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 SFTPCP11686 197 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 COX4I1P13073 169 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 NR0B1P51843 470 aaKnown RBP11.72□□□□□ -0.53
SYNE2-219ENST00000555323 MVDP53602 400 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 TXNL4AP83876 142 aaKnown RBP11.72□□□□□ -0.53
SYNE2-219ENST00000555323 GAB1Q13480 694 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 LASP1Q14847 261 aaKnown RBP11.72□□□□□ -0.53
SYNE2-219ENST00000555323 SPDYE7PQ495Y7 208 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 CYP27C1Q4G0S4 372 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 C6orf10Q5SRN2 563 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 AP1ARQ63HQ0 302 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 FCRLBQ6BAA4 426 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 NPSR1Q6W5P4 371 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 C16orf47Q6ZP98 133 aaPredicted RBP11.72□□□□□ -0.53
SYNE2-219ENST00000555323 SNX32Q86XE0 403 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 MSRB3Q8IXL7 192 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 GPALPP1Q8IXQ4 340 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 DND1Q8IYX4 353 aaKnown RBP11.72□□□□□ -0.53
SYNE2-219ENST00000555323 TAGAPQ8N103 731 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 CLEC4FQ8N1N0 589 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 FITM2Q8N6M3 262 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 SLC16A11Q8NCK7 471 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 CMTM5Q96DZ9 223 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 C16orf58Q96GQ5 468 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 GAL3ST4Q96RP7 486 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 PIGUQ9H490 435 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 TPT1P8Q9HAU6 139 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 ZBTB20Q9HC78 741 aaPredicted RBP11.72□□□□□ -0.53
SYNE2-219ENST00000555323 DUSP22Q9NRW4 184 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 SLC25A37Q9NYZ2 338 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 VAPAQ9P0L0 249 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 ZNF451Q9Y4E5 1061 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 MGAQ8IWI9 3026 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 ZZEF1O43149 2961 aa11.72□□□□□ -0.53
SYNE2-219ENST00000555323 DUXAA6NLW8 204 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 ASNA1O43681 348 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 KRT75O95678 551 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 WDPCPO95876 746 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 KRT16P08779 473 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 ACP2P11117 423 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 MATN1P21941 496 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 SOAT1P35610 550 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 HLCSP50747 726 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 SSR4P51571 173 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 CORO7P57737 925 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 KCNAB2Q13303 367 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 TP53BP2Q13625 1128 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 RAPSNQ13702 412 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 KRT72Q14CN4 511 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 ZNHIT3Q15649 155 aaPredicted RBP11.71□□□□□ -0.53
SYNE2-219ENST00000555323 ZNF791Q3KP31 576 aaPredicted RBP11.71□□□□□ -0.53
SYNE2-219ENST00000555323 GTDC1Q4AE62 458 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 RUNDC3AQ59EK9 446 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 OPN5Q6U736 354 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 PCSK4Q6UW60 755 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 BEST3Q8N1M1 668 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 EXD3Q8N9H8 876 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 PCYOX1LQ8NBM8 494 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 OR5AK3PQ8NH89 298 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 FAM110BQ8TC76 370 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 SLC22A8Q8TCC7 542 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 SLC35A4Q96G79 324 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 ARHGAP9Q9BRR9 750 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 SERHL2Q9H4I8 314 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 Q9N2J8 555 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 ABI3Q9P2A4 366 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 FAF1Q9UNN5 650 aaPredicted RBP11.71□□□□□ -0.53
SYNE2-219ENST00000555323 NPFFR2Q9Y5X5 522 aa11.71□□□□□ -0.53
SYNE2-219ENST00000555323 OR5H15A6NDH6 313 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 K7EM74 188 aa11.7□□□□□ -0.54
SYNE2-219ENST00000555323 CLIC1O00299 241 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms