RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 LIN28AQ9H9Z2 209 aaKnown RBP13.22□□□□□ -0.29
CHD8-208ENST00000555301 Q9N2J8 555 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 EQTNQ9NQ60 294 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 GPATCH2Q9NW75 528 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 GIN1Q9NXP7 522 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 ZNF451Q9Y4E5 1061 aa13.22□□□□□ -0.29
CHD8-208ENST00000555301 ANKRD11Q6UB99 2663 aaPredicted RBP13.22□□□□□ -0.29
CHD8-208ENST00000555301 DUXAA6NLW8 204 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 CAPN14A8MX76 684 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 TO15178 435 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 ALOX5P09917 674 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 CT45A8P0DMV1 189 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 CT45A9P0DMV2 189 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 COX4I1P13073 169 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 PRDX6P30041 224 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 TRHRP34981 398 aaPredicted RBP13.21□□□□□ -0.29
CHD8-208ENST00000555301 CASRP41180 1078 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 MAGEA8P43361 318 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 SSR4P51571 173 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 TXNL4AP83876 142 aaKnown RBP13.21□□□□□ -0.29
CHD8-208ENST00000555301 PSG6Q00889 435 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 CT45A2Q5DJT8 189 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 SAXO2Q658L1 398 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 FAM91A1Q658Y4 838 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 CDC73Q6P1J9 531 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 OPN5Q6U736 354 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 RETREG3Q86VR2 466 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 GPALPP1Q8IXQ4 340 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 DND1Q8IYX4 353 aaKnown RBP13.21□□□□□ -0.29
CHD8-208ENST00000555301 BEST3Q8N1M1 668 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 TMEM156Q8N614 296 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 PCYOX1LQ8NBM8 494 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 ADAMTS15Q8TE58 950 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 ZFP90Q8TF47 636 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 SLC9A6Q92581 669 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 HAS2Q92819 552 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 HOXB13Q92826 284 aaPredicted RBP13.21□□□□□ -0.29
CHD8-208ENST00000555301 WBP1Q96G27 269 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 SLC35G5Q96KT7 338 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 NXF5Q9H1B4 397 aaKnown RBP13.21□□□□□ -0.29
CHD8-208ENST00000555301 PCDHB14Q9Y5E9 798 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 PCDHGB3Q9Y5G1 929 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 CCDC88CQ9P219 2028 aa13.21□□□□□ -0.29
CHD8-208ENST00000555301 FBP2O00757 339 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 MAN1A2O60476 641 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 NME6O75414 186 aaPredicted RBP13.2□□□□□ -0.3
CHD8-208ENST00000555301 NKX2-2O95096 273 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 NADKO95544 446 aaPredicted RBP13.2□□□□□ -0.3
CHD8-208ENST00000555301 NPPAP01160 153 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 FAM87AP0C7U9 286 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 NAGAP17050 411 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 MATN1P21941 496 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 PPIBP23284 216 aaKnown RBP13.2□□□□□ -0.3
CHD8-208ENST00000555301 PTPN6P29350 595 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 MAP3K8P41279 467 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 TMED10P49755 219 aaKnown RBP13.2□□□□□ -0.3
CHD8-208ENST00000555301 ANXA11P50995 505 aaKnown RBP13.2□□□□□ -0.3
CHD8-208ENST00000555301 CORO7P57737 925 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 ARG2P78540 354 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 NFYCQ13952 458 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 CYP27C1Q4G0S4 372 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 REP15Q6BDI9 236 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 IGFL3Q6UXB1 125 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 ANGPTL8Q6UXH0 198 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 C16orf47Q6ZP98 133 aaPredicted RBP13.2□□□□□ -0.3
CHD8-208ENST00000555301 DHDDSQ86SQ9 333 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 TREML1Q86YW5 311 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 SLC44A2Q8IWA5 706 aaPredicted RBP13.2□□□□□ -0.3
CHD8-208ENST00000555301 CLEC4FQ8N1N0 589 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 C9orf43Q8TAL5 461 aaPredicted RBP13.2□□□□□ -0.3
CHD8-208ENST00000555301 MIPOL1Q8TD10 442 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 ASB15Q8WXK1 588 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 JADE3Q92613 823 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 C16orf58Q96GQ5 468 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 STACQ99469 402 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 UTP23Q9BRU9 249 aaKnown RBP13.2□□□□□ -0.3
CHD8-208ENST00000555301 PIGUQ9H490 435 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 RAD21L1Q9H4I0 556 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 TPT1P8Q9HAU6 139 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 DUSP22Q9NRW4 184 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 SLC6A13Q9NSD5 602 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 GID8Q9NWU2 228 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 SLAMF8Q9P0V8 285 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 MAP10Q9P2G4 905 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 MRTO4Q9UKD2 239 aaKnown RBP13.2□□□□□ -0.3
CHD8-208ENST00000555301 OR10H1Q9Y4A9 318 aa13.2□□□□□ -0.3
CHD8-208ENST00000555301 TPRP12270 2363 aaKnown RBP13.2□□□□□ -0.3
CHD8-208ENST00000555301 OR5H15A6NDH6 313 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 A8MVJ9 347 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 MRASO14807 208 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 ASNA1O43681 348 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 WDPCPO95876 746 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 AGR2O95994 175 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 ACP2P11117 423 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 HOXB9P17482 250 aaPredicted RBP13.19□□□□□ -0.3
CHD8-208ENST00000555301 ABCD3P28288 659 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 GABRA3P34903 492 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 KRT20P35900 424 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 CYB561P49447 251 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 HLCSP50747 726 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms