RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 B3GALT1Q9Y5Z6 326 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 EPG5Q9HCE0 2579 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 NBEAQ8NFP9 2946 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 ITPR1Q14643 2758 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 TMEM150CB9EJG8 249 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 RGS10O43665 173 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 PFDN1O60925 122 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 CRATP43155 626 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 CCR8P51685 355 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 CRYBA2P53672 197 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 GP2P55259 537 aaKnown RBP16.31■□□□□ 0.2
SHOX-204ENST00000554971 HBA1P69905 142 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 RPP38P78345 283 aaKnown RBP16.31■□□□□ 0.2
SHOX-204ENST00000554971 C2orf80Q0P641 193 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 RTP5Q14D33 572 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.31■□□□□ 0.2
SHOX-204ENST00000554971 SLC16A12Q6ZSM3 486 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 ZNF285Q96NJ3 590 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 CSF3RQ99062 836 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 ZFYVE21Q9BQ24 234 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 PSD2Q9BQI7 771 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 SLC35A5Q9BS91 424 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 SARGQ9BW04 601 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 CCDC90BQ9GZT6 254 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 RHBGQ9H310 441 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 PELI2Q9HAT8 420 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 PCDHGA10Q9Y5H3 936 aa16.31■□□□□ 0.2
SHOX-204ENST00000554971 TNFSF15O95150 251 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 BCL6P41182 706 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 PRIM2P49643 509 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 ST13P50502 369 aaKnown RBP16.3■□□□□ 0.2
SHOX-204ENST00000554971 RELAQ04206 551 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 ADNP2Q6IQ32 1131 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 TMIGD1Q6UXZ0 262 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 VN1R4Q7Z5H5 301 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 MCATQ8IVS2 390 aaKnown RBP16.3■□□□□ 0.2
SHOX-204ENST00000554971 ANKRD53Q8N9V6 530 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 TANKQ92844 425 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 ZNF764Q96H86 408 aaPredicted RBP16.3■□□□□ 0.2
SHOX-204ENST00000554971 QRFPRQ96P65 431 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 TMEM121BQ9BXQ6 578 aaPredicted RBP16.3■□□□□ 0.2
SHOX-204ENST00000554971 NT5DC2Q9H857 520 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 SLC39A1Q9NY26 324 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 NDUFAF4Q9P032 175 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 FOXJ2Q9P0K8 574 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 AKAP7Q9P0M2 348 aaPredicted RBP16.3■□□□□ 0.2
SHOX-204ENST00000554971 USP24Q9UPU5 2620 aa16.3■□□□□ 0.2
SHOX-204ENST00000554971 CDRT15L2A8MXV6 281 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 TMEM229AB2RXF0 380 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 TNFRSF11BO00300 401 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 POLR1CO15160 346 aaPredicted RBP16.29■□□□□ 0.2
SHOX-204ENST00000554971 GCM2O75603 506 aaPredicted RBP16.29■□□□□ 0.2
SHOX-204ENST00000554971 NTRK1P04629 796 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 NUDT7P0C024 238 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 FGF5P12034 268 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 CD247P20963 164 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 BMXP51813 675 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 HMGA2P52926 109 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 SNRPNP63162 240 aaKnown RBP16.29■□□□□ 0.2
SHOX-204ENST00000554971 REEP5Q00765 189 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 ACY1Q03154 408 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 OCA2Q04671 838 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 SCARB2Q14108 478 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 CTF1Q16619 201 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 ZNF385BQ569K4 471 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 PWWP2BQ6NUJ5 590 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 IGF2-ASQ6U949 168 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 ARMC8Q8IUR7 673 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 ZNF540Q8NDQ6 660 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 SGCDQ92629 289 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 VMP1Q96GC9 406 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 PLEKHA8Q96JA3 519 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 DGCR6LQ9BY27 220 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 STARD5Q9NSY2 213 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 ERVK-18Q9QC07 812 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 POFUT2Q9Y2G5 429 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 PCDHGA4Q9Y5G9 962 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 LYVE1Q9Y5Y7 322 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 A0A1W2PRB8 838 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 P2RX6O15547 441 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 XPNPEP2O43895 674 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 BRINP1O60477 761 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 DXOO77932 396 aaKnown RBP16.29■□□□□ 0.2
SHOX-204ENST00000554971 INMTO95050 263 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 C1QCP02747 245 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 ZNF28P17035 718 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 UQCRC2P22695 453 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 RRM2P31350 389 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 EEF1A2Q05639 463 aaKnown RBP16.29■□□□□ 0.2
SHOX-204ENST00000554971 IL11RAQ14626 422 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 SLC38A9Q8NBW4 561 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 SPPL2AQ8TCT8 520 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 GEMIN6Q8WXD5 167 aaKnown RBP16.29■□□□□ 0.2
SHOX-204ENST00000554971 S100ZQ8WXG8 99 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 YIPF6Q96EC8 236 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 SPRTNQ9H040 489 aaPredicted RBP16.29■□□□□ 0.2
SHOX-204ENST00000554971 ENAMQ9NRM1 1142 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 FAIMQ9NVQ4 179 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 GPATCH2Q9NW75 528 aa16.29■□□□□ 0.2
SHOX-204ENST00000554971 PLCL2Q9UPR0 1127 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms