RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LYG1Q8N1E2 194 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 LRRC15Q8TF66 581 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 FAM222BQ8WU58 562 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 U2AF1L4Q8WU68 220 aaKnown RBP2.51□□□□□ -2.01
SCFD1-213ENST00000554776 LHX4Q969G2 390 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 DTNBP1Q96EV8 351 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 CPXM1Q96SM3 734 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 FAM114A2Q9NRY5 505 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 STARD5Q9NSY2 213 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 GPR83Q9NYM4 423 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 TMOD2Q9NZR1 351 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 CHRNA9Q9UGM1 479 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 KLK13Q9UKR3 277 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 EMCNQ9ULC0 261 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 FOXJ3Q9UPW0 622 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 ATP6V0A2Q9Y487 856 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 MFHAS1Q9Y4C4 1052 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 SMAD5-AS1Q9Y6J3 95 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 STYXL1Q9Y6J8 313 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 SYNJ2O15056 1496 aa2.51□□□□□ -2.01
SCFD1-213ENST00000554776 COL5A2P05997 1499 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-213ENST00000554776 PARD3Q8TEW0 1356 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 A0A0A6YYD4 124 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 RNF222A6NCQ9 220 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 SHISA9B4DS77 424 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 OR4F21O95013 312 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 IGSF6O95976 241 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 HCKP08631 526 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 FCGR3AP08637 254 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ANXA4P09525 319 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-213ENST00000554776 EPB41P11171 864 aaKnown RBP2.5□□□□□ -2.01
SCFD1-213ENST00000554776 HSD17B1P14061 328 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 KIF5BP33176 963 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 SPRP35270 261 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-213ENST00000554776 CYLC1P35663 651 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-213ENST00000554776 PTGFRP43088 359 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 BRCC3P46736 316 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 POU3F4P49335 361 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 CSRP3P50461 194 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 DSCR10P59022 87 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 GSTO1P78417 241 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 MRPS6P82932 125 aaKnown RBP2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ACY1Q03154 408 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ELP6Q0PNE2 266 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ELAVL2Q12926 359 aaKnown RBP2.5□□□□□ -2.01
SCFD1-213ENST00000554776 CYLC2Q14093 348 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-213ENST00000554776 CCL14Q16627 93 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 HAGHQ16775 308 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ACSF3Q4G176 576 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ACER2Q5QJU3 275 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ASPHD2Q6ICH7 369 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ZNF343Q6P1L6 599 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 EMBQ6PCB8 327 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 RFWD3Q6PCD5 774 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ARSKQ6UWY0 536 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 GPRIN3Q6ZVF9 776 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 LHFPL4Q7Z7J7 247 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 CATSPER3Q86XQ3 398 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ABHD12Q8N2K0 398 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 Q8N377 158 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ZNF671Q8TAW3 534 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 GIPC3Q8TF64 312 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 NPRL2Q8WTW4 380 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ST6GALNAC5Q9BVH7 336 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ZNF416Q9BWM5 594 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 GPR174Q9BXC1 333 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 OCR1Q9BZK8 76 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ADNPQ9H2P0 1102 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 SP140LQ9H930 580 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 CALHM2Q9HA72 323 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ELL3Q9HB65 397 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ESM1Q9NQ30 184 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 C1orf123Q9NWV4 160 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 UTP6Q9NYH9 597 aaKnown RBP2.5□□□□□ -2.01
SCFD1-213ENST00000554776 RDH8Q9NYR8 311 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ATP6V1HQ9UI12 483 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 RARRES3Q9UL19 164 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 ZNF490Q9ULM2 529 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-213ENST00000554776 TMCC3Q9ULS5 477 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 CHMP2BQ9UQN3 213 aa2.5□□□□□ -2.01
SCFD1-213ENST00000554776 A0A1B0GTH9 108 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 A0A1B0GUL7 405 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 TTC26A0AVF1 554 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 RNF212BA8MTL3 300 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-213ENST00000554776 CASKO14936 926 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 BUB1O43683 1085 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 NOL3O60936 208 aaKnown RBP2.49□□□□□ -2.01
SCFD1-213ENST00000554776 PDE5AO76074 875 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 NDUFA7O95182 113 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 IGHG1P01857 330 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 PCCBP05166 539 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 SLC35G4P0C7Q5 338 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 CALCBP10092 127 aa2.49□□□□□ -2.01
SCFD1-213ENST00000554776 HSPA5P11021 654 aaKnown RBP2.49□□□□□ -2.01
SCFD1-213ENST00000554776 GATA1P15976 413 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-213ENST00000554776 ACAA2P42765 397 aaKnown RBP2.49□□□□□ -2.01
SCFD1-213ENST00000554776 HERVK_113P63132 956 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms