RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 PRKAG1P54619 331 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 CORO7P57737 925 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 MLF1P58340 268 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 DCAF7P61962 342 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 ZNF155Q12901 538 aaPredicted RBP16.69■□□□□ 0.26
PSEN1-208ENST00000553719 NFYCQ13952 458 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 LASP1Q14847 261 aaKnown RBP16.69■□□□□ 0.26
PSEN1-208ENST00000553719 TBR1Q16650 682 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 MMEL1Q495T6 779 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 TCTN3Q6NUS6 607 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 CDC73Q6P1J9 531 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 WDR53Q7Z5U6 358 aaPredicted RBP16.69■□□□□ 0.26
PSEN1-208ENST00000553719 SIRT6Q8N6T7 355 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 CDRT4Q8N9R6 151 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 PCYOX1LQ8NBM8 494 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 SLC16A11Q8NCK7 471 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 OR5L2Q8NGL0 311 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 APOBEC4Q8WW27 367 aaKnown RBP16.69■□□□□ 0.26
PSEN1-208ENST00000553719 ROPN1LQ96C74 230 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 SLC35G5Q96KT7 338 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 ANKRD27Q96NW4 1050 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 ACTRT3Q9BYD9 372 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 NXF5Q9H1B4 397 aaKnown RBP16.69■□□□□ 0.26
PSEN1-208ENST00000553719 ZNF552Q9H707 407 aaPredicted RBP16.69■□□□□ 0.26
PSEN1-208ENST00000553719 EQTNQ9NQ60 294 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 GIN1Q9NXP7 522 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 EXPH5Q8NEV8 1989 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 FRG2CA6NGY1 282 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 TTC36A6NLP5 189 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 DRD5P21918 477 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 MAGEA8P43361 318 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 PRIM2P49643 509 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 RPS26P62854 115 aaKnown RBP16.68■□□□□ 0.26
PSEN1-208ENST00000553719 DUSP5Q16690 384 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 CRB2Q5IJ48 1285 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 B3GNTL1Q67FW5 361 aaPredicted RBP16.68■□□□□ 0.26
PSEN1-208ENST00000553719 BORAQ6PGQ7 559 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 LYPD8Q6UX82 237 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 C16orf47Q6ZP98 133 aaPredicted RBP16.68■□□□□ 0.26
PSEN1-208ENST00000553719 SZRD1Q7Z422 152 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 RPS19BP1Q86WX3 136 aaKnown RBP16.68■□□□□ 0.26
PSEN1-208ENST00000553719 RNF130Q86XS8 419 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 C10orf111Q8N326 155 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 SLC5A8Q8N695 610 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 FDCSPQ8NFU4 85 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 FBXO27Q8NI29 283 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 LCORQ96JN0 433 aaPredicted RBP16.68■□□□□ 0.26
PSEN1-208ENST00000553719 GAL3ST4Q96RP7 486 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 STACQ99469 402 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 SLC39A3Q9BRY0 314 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 EFCAB1Q9HAE3 211 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 DUSP22Q9NRW4 184 aa16.68■□□□□ 0.26
PSEN1-208ENST00000553719 CLIC1O00299 241 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 AIM2O14862 343 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 ACOX3O15254 700 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 ASNA1O43681 348 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 UBOX5O94941 541 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 KRT75O95678 551 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 BMP2P12643 396 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 SLC6A2P23975 617 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 CHI3L1P36222 383 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-208ENST00000553719 CPA2P48052 419 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 SELPLGQ14242 412 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 CAPRIN1Q14444 709 aaKnown RBP16.67■□□□□ 0.26
PSEN1-208ENST00000553719 PIGGQ5H8A4 983 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 ACER2Q5QJU3 275 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 COX20Q5RI15 118 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 FCRLBQ6BAA4 426 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 IGFL2Q6UWQ7 119 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 OR8J3Q8NGG0 315 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 OR52N2Q8NGI0 321 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 FBXO30Q8TB52 745 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 THAP3Q8WTV1 239 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-208ENST00000553719 NSL1Q96IY1 281 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 PIGUQ9H490 435 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 LIN28AQ9H9Z2 209 aaKnown RBP16.67■□□□□ 0.26
PSEN1-208ENST00000553719 IL1RL2Q9HB29 575 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 RYDENQ9NUL5 291 aaKnown RBP16.67■□□□□ 0.26
PSEN1-208ENST00000553719 GPR83Q9NYM4 423 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 PCDHGA9Q9Y5G4 932 aaKnown RBP16.67■□□□□ 0.26
PSEN1-208ENST00000553719 EPG5Q9HCE0 2579 aa16.67■□□□□ 0.26
PSEN1-208ENST00000553719 WWP2O00308 870 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 HMGN4O00479 90 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 ITGA10O75578 1167 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 KRT16P08779 473 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 GPX2P18283 190 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 MATN1P21941 496 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 CALB2P22676 271 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 PPIBP23284 216 aaKnown RBP16.66■□□□□ 0.26
PSEN1-208ENST00000553719 TRHRP34981 398 aaPredicted RBP16.66■□□□□ 0.26
PSEN1-208ENST00000553719 NUDT2P50583 147 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 CCL11P51671 97 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 PSPHP78330 225 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 TXNL4AP83876 142 aaKnown RBP16.66■□□□□ 0.26
PSEN1-208ENST00000553719 FADDQ13158 208 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 RGNQ15493 299 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 NNATQ16517 81 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 MEP1AQ16819 746 aa16.66■□□□□ 0.26
PSEN1-208ENST00000553719 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.66■□□□□ 0.26
PSEN1-208ENST00000553719 NANOGP8Q6NSW7 305 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms