RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 REV3LO60673 3130 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 SZT2Q5T011 3432 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 DUXAA6NLW8 204 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 H3BMH7 237 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 CYR61O00622 381 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 PGRMC2O15173 223 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 GSTA4O15217 222 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 EMC8O43402 210 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 SCN2BO60939 215 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 RDH16O75452 317 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 AIFM1O95831 613 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 C6orf47O95873 294 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 ONECUT2O95948 504 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 AGR2O95994 175 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 C8BP07358 591 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 FHP07954 510 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 ABCB1P08183 1280 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 SLC35E2P0CK97 266 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 HSD17B1P14061 328 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 CPMP14384 443 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 HOXB6P17509 224 aaKnown RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 GPX2P18283 190 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 TNNI3P19429 210 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 SLC6A2P23975 617 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 HTR1EP28566 365 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 DNAJA1P31689 397 aaKnown RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 CHI3L1P36222 383 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 CPOXP36551 454 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 PLA2G5P39877 138 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 XCR1P46094 333 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 CCT3P49368 545 aaKnown RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 PRIM2P49643 509 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 NCBP2P52298 156 aaKnown RBP eCLIP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 WNT3P56703 355 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 PHC1P78364 1004 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 PLIN5Q00G26 463 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 RBBP4Q09028 425 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 BNIP2Q12982 314 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 FADDQ13158 208 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 SLC13A2Q13183 592 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 LSAMPQ13449 338 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 TRIM25Q14258 630 aaKnown RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 GNA13Q14344 377 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 CEBPEQ15744 281 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 ISXQ2M1V0 245 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 MFSD4BQ5TF39 518 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 ARHGAP40Q5TG30 622 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 FAM219BQ5XKK7 198 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 C18orf63Q68DL7 685 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 ZCCHC12Q6PEW1 402 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 DLEU7Q6UYE1 221 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 TMEM64Q6YI46 380 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 TMPRSS9Q7Z410 1059 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 NET1Q7Z628 596 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 SLC30A8Q8IWU4 369 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 SLC15A3Q8IY34 581 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 LRRC25Q8N386 305 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 METTL25Q8N6Q8 603 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 AMER3Q8N944 861 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 RCBTB1Q8NDN9 531 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 PLPP5Q8NEB5 264 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 OR56A1Q8NGH5 318 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 PSMA8Q8TAA3 256 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 SFXN5Q8TD22 340 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 MIEF2Q96C03 454 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 ART5Q96L15 291 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 C10orf90Q96M02 699 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 LRGUKQ96M69 825 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 DGAT2Q96PD7 388 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 GPATCH1Q9BRR8 931 aaKnown RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 DDA1Q9BW61 102 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 ALOXE3Q9BYJ1 711 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 TRIM15Q9C019 465 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 PAIP1Q9H074 479 aaKnown RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 TPT1P8Q9HAU6 139 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 RXFP3Q9NSD7 469 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 OCIAD1Q9NX40 245 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 TEX10Q9NXF1 929 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 PTGFRNQ9P2B2 879 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 TMEM181Q9P2C4 612 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 IFT80Q9P2H3 777 aaPredicted RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 TRPC4Q9UBN4 977 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 NXT1Q9UKK6 140 aaKnown RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 CFL2Q9Y281 166 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 PCDHGA7Q9Y5G6 932 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 GMEB1Q9Y692 573 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.69□□□□□ -1.66
VTI1B-202ENST00000553619 KNTC1P50748 2209 aa4.69□□□□□ -1.66
VTI1B-202ENST00000553619 IGLV3-12A0A075B6K2 115 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 A0A087WV62 115 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 ELOVL7A1L3X0 281 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 GLOD5A6NK44 160 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 C4orf51C9J302 202 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 C9J4A7 227 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 C9JVG2 144 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 PLOD2O00469 737 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 SLC30A4O14863 429 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 PLD2O14939 933 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 HCRTR1O43613 425 aa4.68□□□□□ -1.66
VTI1B-202ENST00000553619 OR10H2O60403 315 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms