RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 GUCA1BQ9UMX6 200 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 VWA7Q9Y334 891 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 PLCE1Q9P212 2302 aa6.61□□□□□ -1.35
ATXN3-219ENST00000553488 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 ANKDD1BA6NHY2 528 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 A8MXE2 369 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 TAPBPO15533 448 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 PRKRAO75569 313 aaKnown RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 TRAPPC6AO75865 159 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 TNFSF13O75888 250 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 SOX30O94993 753 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 RCBTB2O95199 551 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 WISP3O95389 354 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 ACSL3O95573 720 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 CNOT4O95628 575 aaKnown RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 IFNGR1P15260 489 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 PAX1P15863 534 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 HIST1H1TP22492 207 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 CPN2P22792 545 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 CRYGSP22914 178 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 HPDP32754 393 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 MSH2P43246 934 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 CPA2P48052 419 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 PTH2RP49190 550 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 PCYT1AP49585 367 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 HERVK_113P63132 956 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 ERVK-8P63133 956 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 POU4F1Q01851 419 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 TNFRSF17Q02223 184 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 MVKQ03426 396 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 DOC2AQ14183 400 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 TSNQ15631 228 aaKnown RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 ACKR1Q16570 336 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 SPANXN3Q5MJ09 141 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 RNASEH2BQ5TBB1 312 aaKnown RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 TRMT10BQ6PF06 316 aaKnown RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 TMEM64Q6YI46 380 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 SLC29A4Q7RTT9 530 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 ADAMTSL2Q86TH1 951 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 IGDCC3Q8IVU1 814 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 ST13P4Q8IZP2 240 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 GCNT2Q8N0V5 402 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 FAM83FQ8NEG4 500 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 GABPB2Q8TAK5 448 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 SPPL2AQ8TCT8 520 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 DOK4Q8TEW6 326 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 ZNF473Q8WTR7 871 aaKnown RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 ABTB1Q969K4 478 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 CTHRC1Q96CG8 243 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 PTCD3Q96EY7 689 aaKnown RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 GNRHR2Q96P88 292 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 SECISBP2Q96T21 854 aaKnown RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 EGFL8Q99944 293 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 PIGQQ9BRB3 760 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 TBCDQ9BTW9 1192 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 EFCAB11Q9BUY7 163 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 ERVK-6Q9BXR3 956 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 ROGDIQ9GZN7 287 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 PIGMQ9H3S5 423 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 UBTD1Q9HAC8 227 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 TEX10Q9NXF1 929 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 FETUBQ9UGM5 382 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 ERVK-19Q9WJR5 959 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 EIF3LQ9Y262 564 aaKnown RBP6.6□□□□□ -1.35
ATXN3-219ENST00000553488 WIF1Q9Y5W5 379 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 PSAT1Q9Y617 370 aa6.6□□□□□ -1.35
ATXN3-219ENST00000553488 A0A1W2PNV4 684 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 A0A1W2PS29 197 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 OR6C76A6NM76 312 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 RNF212BA8MTL3 300 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 CES2O00748 559 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 TP53I11O14683 189 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 HCRTR2O43614 444 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 H2AFYO75367 372 aaKnown RBP6.59□□□□□ -1.35
ATXN3-219ENST00000553488 SNX4O95219 450 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 TTC4O95801 387 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 ACTL6AO96019 429 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 CYP4B1P13584 511 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 CPN1P15169 458 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 ALOX15P16050 662 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-219ENST00000553488 FPR1P21462 350 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 CXCR5P32302 372 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 GGT5P36269 586 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 CPOXP36551 454 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 PTGDSP41222 190 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 MC3RP41968 323 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 CASP3P42574 277 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 CASP2P42575 452 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 RPL21P46778 160 aaKnown RBP6.59□□□□□ -1.35
ATXN3-219ENST00000553488 HNRNPH2P55795 449 aaKnown RBP6.59□□□□□ -1.35
ATXN3-219ENST00000553488 TGM3Q08188 693 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 LAPTM5Q13571 262 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 RCAN2Q14206 197 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 TGFBIQ15582 683 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 CYP1B1Q16678 543 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 FBXO48Q5FWF7 155 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 HLA-DQA1Q5Y7H0 255 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 STEAP4Q687X5 459 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 C18orf63Q68DL7 685 aa6.59□□□□□ -1.35
ATXN3-219ENST00000553488 TIGD3Q6B0B8 471 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms