RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 PLOD2O00469 737 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 COQ9O75208 318 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 CELA3AP09093 270 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 IFI6P09912 130 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 RFPL3SP0C7P2 107 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 DDX5P17844 614 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 GDF1P27539 372 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 ALDH3A1P30838 453 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 NTSP30990 170 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 PTGER4P35408 488 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 MRPS22P82650 360 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 SF3B4Q15427 424 aaKnown RBP eCLIP12.05□□□□□ -0.484e-14■■■□□ 17.3
HNRNPC-205ENST00000553300 KANK2Q63ZY3 851 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 TIGD3Q6B0B8 471 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 Q6ZSR9 355 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 CROCCP2Q86T23 111 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 PRR22Q8IZ63 422 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 CDC26Q8NHZ8 85 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 NEIL3Q8TAT5 605 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 KAT2AQ92830 837 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 MARVELD3Q96A59 401 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 SDCCAG3Q96C92 435 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 NTNG2Q96CW9 530 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 OMA1Q96E52 524 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 ZNF764Q96H86 408 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 VSTM2LQ96N03 204 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 CCT7Q99832 543 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 TNFRSF12AQ9NP84 129 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 PNPLA3Q9NST1 481 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 RAB21Q9UL25 225 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 TRAF6Q9Y4K3 522 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 POLR3HQ9Y535 204 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 HRH3Q9Y5N1 445 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 DNAJC15Q9Y5T4 150 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 LIPGQ9Y5X9 500 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 EXPH5Q8NEV8 1989 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 ADGRG4Q8IZF6 3080 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 CREBBPQ92793 2442 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 ESPNB1AK53 854 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 SPAG7O75391 227 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 ERN1O75460 977 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 HPNP05981 417 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 FREM3P0C091 2139 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 CT45A8P0DMV1 189 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 CT45A9P0DMV2 189 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 CHRNB4P30926 498 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 KRT20P35900 424 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 NCBP2P52298 156 aaKnown RBP eCLIP12.05□□□□□ -0.486e-71■■■□□ 15.1
HNRNPC-205ENST00000553300 EFR3AQ14156 821 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 CT45A2Q5DJT8 189 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 ARL13AQ5H913 290 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 ZNF585AQ6P3V2 769 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 B3GNT6Q6ZMB0 384 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 SIMC1Q8NDZ2 872 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 OR5M9Q8NGP3 310 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 HGDQ93099 445 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 FCRL1Q96LA6 429 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 COL21A1Q96P44 957 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 UBQLN3Q9H347 655 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 C19orf53Q9UNZ5 99 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 C15orf41Q9Y2V0 281 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 V9GYY5 206 aaPredicted RBP12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 TTC36A6NLP5 189 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 RGS16O15492 202 aaPredicted RBP12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 TYROBPO43914 113 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 TBX19O60806 448 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 REM1O75628 298 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 TRAPPC6AO75865 159 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 LRATO95237 230 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 JUNP05412 331 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 COX6B1P14854 86 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 GRNP28799 593 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 ASMTP46597 345 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 CDK9P50750 372 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 PNLIPRP2P54317 469 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 PMPCAQ10713 525 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 NNATQ16517 81 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 KRT71Q3SY84 523 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 FNDC7Q5VTL7 733 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 DDIASQ8IXT1 998 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 MARVELD2Q8N4S9 558 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 OR7G2Q8NG99 324 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 OR1J4Q8NGS1 313 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 LILRB4Q8NHJ6 448 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 TMBIM1Q969X1 311 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 MTERF3Q96E29 417 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 SLC35A4Q96G79 324 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 AMDHD1Q96NU7 426 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 GNRHR2Q96P88 292 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 OSBPL11Q9BXB4 747 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 FOLH1BQ9HBA9 442 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 SSU72Q9NP77 194 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 KLRF1Q9NZS2 232 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 SLC17A7Q9P2U7 560 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 FIS1Q9Y3D6 152 aa12.04□□□□□ -0.48
HNRNPC-205ENST00000553300 ABCA12Q86UK0 2595 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 PRAMEF25A6NGN4 478 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 AHRRA9YTQ3 701 aa12.03□□□□□ -0.48
HNRNPC-205ENST00000553300 TMEM114B3SHH9 223 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms