RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 MERTKQ12866 999 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 ANKRD34AQ69YU3 496 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 C16orf62Q7Z3J2 963 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 COMTD1Q86VU5 262 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 CDRT4Q8N9R6 151 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 HOXB13Q92826 284 aaPredicted RBP18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 ZG16BQ96DA0 208 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 ZNF347Q96SE7 839 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 ADI1Q9BV57 179 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 ZNF304Q9HCX3 659 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 EXD2Q9NVH0 621 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 SIDT1Q9NXL6 827 aaKnown RBP18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 PCDHGB2Q9Y5G2 931 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 HRKO00198 91 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 GALR2O43603 387 aaPredicted RBP18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 FCMRO60667 390 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 ATXN8OSP0DMR3 200 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 ITGA2P17301 1181 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 FPR1P21462 350 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 GRK6P43250 576 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 PDX1P52945 283 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 MLIPQ5VWP3 458 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 OR52R1Q8NGF1 315 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 NRBF2Q96F24 287 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 ZNF354BQ96LW1 612 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 CNBD2Q96M20 576 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 DGAT2Q96PD7 388 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 OR6C1Q96RD1 312 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 RBM4BQ9BQ04 359 aaKnown RBP18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 WFDC6Q9BQY6 131 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 RBM4Q9BWF3 364 aaKnown RBP18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 QRSL1Q9H0R6 528 aaKnown RBP18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 REEP1Q9H902 201 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 C11orf16Q9NQ32 467 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 DUSP22Q9NRW4 184 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 CALML5Q9NZT1 146 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 IFT80Q9P2H3 777 aaPredicted RBP18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 ENPP4Q9Y6X5 453 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 EPPINO95925 133 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 RRM2P31350 389 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 LAPTM4AQ15012 233 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 ARHGAP11BQ3KRB8 267 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 SLC36A3Q495N2 470 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 C1orf189Q5VU69 101 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 RHBDD2Q6NTF9 364 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 HMGN2P46Q86SG4 172 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 CARM1Q86X55 608 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 PROX1Q92786 737 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 GFM1Q96RP9 751 aaKnown RBP18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 STACQ99469 402 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 YIPF2Q9BWQ6 316 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 ANKRD60Q9BZ19 345 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 GABARAPL1Q9H0R8 117 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 PCDHGB3Q9Y5G1 929 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 D6RAR5 112 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 J3KTA2 159 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 SEMA7AO75326 666 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 IFNW1P05000 195 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 YAP1P46937 504 aaKnown RBP18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 SERTAD2Q14140 314 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 UGT2A3Q6UWM9 527 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 ZNF605Q86T29 641 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 EPYCQ99645 322 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 SPATA5L1Q9BVQ7 753 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 SRPK3Q9UPE1 567 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 MMACHCQ9Y4U1 282 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 LYVE1Q9Y5Y7 322 aa18.23■□□□□ 0.51
RBFOX1-215ENST00000553186 KMT2EQ8IZD2 1858 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 IGKV3D-11A0A0A0MRZ8 115 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 AGRPO00253 132 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 ADAMDEC1O15204 470 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 DNAJB5O75953 348 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 TIAF1O95411 115 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 ALOX5P09917 674 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 UBTFL6P0CB48 400 aaPredicted RBP18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 FBLP22087 321 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 EMDP50402 254 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 EFNA3P52797 238 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 FRRS1Q6ZNA5 592 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 SLC38A9Q8NBW4 561 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 CHDHQ8NE62 594 aaPredicted RBP18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 OR4D11Q8NGI4 311 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 CNDP2Q96KP4 475 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 PTCHD1Q96NR3 888 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 SDF2Q99470 211 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 TMEFF2Q9UIK5 374 aaPredicted RBP18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 TESMINQ9Y4I5 508 aa18.22■□□□□ 0.51
RBFOX1-215ENST00000553186 COQ9O75208 318 aa18.21■□□□□ 0.51
RBFOX1-215ENST00000553186 GNAO1P09471 354 aa18.21■□□□□ 0.51
RBFOX1-215ENST00000553186 SSTR4P31391 388 aa18.21■□□□□ 0.51
RBFOX1-215ENST00000553186 GALNSP34059 522 aa18.21■□□□□ 0.51
RBFOX1-215ENST00000553186 ARHGDIAP52565 204 aa18.21■□□□□ 0.51
RBFOX1-215ENST00000553186 BIKQ13323 160 aa18.21■□□□□ 0.51
RBFOX1-215ENST00000553186 QSOX2Q6ZRP7 698 aa18.21■□□□□ 0.51
RBFOX1-215ENST00000553186 ATOH1Q92858 354 aaPredicted RBP18.21■□□□□ 0.51
RBFOX1-215ENST00000553186 RDH12Q96NR8 316 aa18.21■□□□□ 0.51
RBFOX1-215ENST00000553186 PIP5K1AQ99755 562 aa18.21■□□□□ 0.51
RBFOX1-215ENST00000553186 SLC22A11Q9NSA0 550 aa18.21■□□□□ 0.51
RBFOX1-215ENST00000553186 SATB2Q9UPW6 733 aa18.21■□□□□ 0.51
RBFOX1-215ENST00000553186 EIF4E1BA6NMX2 242 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms