RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 NTMQ9P121 344 aa10.8□□□□□ -0.68
TRAFD1-209ENST00000552896 NPFFR2Q9Y5X5 522 aa10.8□□□□□ -0.68
TRAFD1-209ENST00000552896 CHCHD2Q9Y6H1 151 aaPredicted RBP10.8□□□□□ -0.68
TRAFD1-209ENST00000552896 RELNP78509 3460 aa10.8□□□□□ -0.68
TRAFD1-209ENST00000552896 BAHCC1Q9P281 2608 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 TTC36A6NLP5 189 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 TCP11X1B4DZS4 312 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 E9PBE3 544 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 KLRC4-KLRK1H3BQV0 150 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 RNASET2O00584 256 aaKnown RBP10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 PPM1BO75688 479 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 CCL3P10147 92 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 IDO1P14902 403 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 ZNF24P17028 368 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 NAGAP17050 411 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 MEOX1P50221 254 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 CDK9P50750 372 aaKnown RBP10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 TDGF1P3P51864 188 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 PLCXD2Q0VAA5 305 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 NXNQ6DKJ4 435 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 EPGNQ6UW88 154 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 GK5Q6ZS86 529 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 FAM47EQ6ZV65 393 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 ACAD11Q709F0 780 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 SLC34A3Q8N130 599 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 FBXW8Q8N3Y1 598 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 ZFP62Q8NB50 900 aaPredicted RBP10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 ST6GALNAC3Q8NDV1 305 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 FAM13CQ8NE31 585 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 OR10G3Q8NGC4 313 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 OR8J2Q8NGG1 315 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 CEP70Q8NHQ1 597 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 SFXN5Q8TD22 340 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 HOXB13Q92826 284 aaPredicted RBP10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 SECISBP2Q96T21 854 aaKnown RBP10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 DUSP26Q9BV47 211 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 CLMPQ9H6B4 373 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 SIRT3Q9NTG7 399 aaPredicted RBP10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 SACM1LQ9NTJ5 587 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 CNIH4Q9P003 139 aa10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 GPR55Q9Y2T6 319 aaPredicted RBP10.79□□□□□ -0.68
TRAFD1-209ENST00000552896 LRRK2Q5S007 2527 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 A0A0G2JMM0 328 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 A0A1W2PPB8 328 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 A0A1W2PRB8 838 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 A0A1W2PRS3 328 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 KIR3DP1A8MWS1 328 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 TP53I11O14683 189 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 POLR3GO15318 223 aaPredicted RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 PEX1O43933 1283 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 DIAPH2O60879 1101 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 P04436 131 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 CT45A8P0DMV1 189 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 CT45A9P0DMV2 189 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 EDN3P14138 238 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 EFNA1P20827 205 aaPredicted RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 KIR3DL1P43629 444 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 CORO7P57737 925 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 FBXW4P57775 412 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 RPP38P78345 283 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 PRR5P85299 388 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 PSG6Q00889 435 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 SRSF11Q05519 484 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 ZNHIT3Q15649 155 aaPredicted RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 IGFBP7Q16270 282 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 GSTA3Q16772 222 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 PGS1Q32NB8 556 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 LSM12Q3MHD2 195 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 PDCD4Q53EL6 469 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 CT45A2Q5DJT8 189 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 TBCELQ5QJ74 424 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 SLC22A10Q63ZE4 541 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 NPSR1Q6W5P4 371 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 TMEM64Q6YI46 380 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 SULF2Q8IWU5 870 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 CPSF7Q8N684 471 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 OR2M7Q8NG81 312 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 OR5P2Q8WZ92 322 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 OMA1Q96E52 524 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 OR52B2Q96RD2 323 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 FAM173AQ9BQD7 235 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 SIKE1Q9BRV8 207 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 LMF2Q9BU23 707 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 C3orf14Q9HBI5 128 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 TCF7L2Q9NQB0 619 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 DEPPQ9NTK1 212 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 FAM120CQ9NX05 1096 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 CNOT11Q9UKZ1 510 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 VPS4AQ9UN37 437 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 GPR45Q9Y5Y3 372 aa10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 USP9XQ93008 2570 aaPredicted RBP10.78□□□□□ -0.68
TRAFD1-209ENST00000552896 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.77□□□□□ -0.69
TRAFD1-209ENST00000552896 ANKRD33BA6NCL7 494 aa10.77□□□□□ -0.69
TRAFD1-209ENST00000552896 OR6C70A6NIJ9 312 aa10.77□□□□□ -0.69
TRAFD1-209ENST00000552896 ACOT7O00154 380 aa10.77□□□□□ -0.69
TRAFD1-209ENST00000552896 UBDO15205 165 aa10.77□□□□□ -0.69
TRAFD1-209ENST00000552896 EMC8O43402 210 aa10.77□□□□□ -0.69
TRAFD1-209ENST00000552896 EDF1O60869 148 aaKnown RBP10.77□□□□□ -0.69
TRAFD1-209ENST00000552896 WISP1O95388 367 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms