RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 PGRP06401 933 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 VIMP08670 466 aaKnown RBP9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 ALOX5P09917 674 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 ZNF24P17028 368 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 PPIBP23284 216 aaKnown RBP9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 ABCD3P28288 659 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 ADSLP30566 484 aaPredicted RBP9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 SOX3P41225 446 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 CD97P48960 835 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 CCT3P49368 545 aaKnown RBP9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 AQP5P55064 265 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 ALDH6A1Q02252 535 aaKnown RBP9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 TLE1Q04724 770 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 HSPB3Q12988 150 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 GNA13Q14344 377 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 ZNF791Q3KP31 576 aaPredicted RBP9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 TRMT12Q53H54 448 aaKnown RBP9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 FCRLBQ6BAA4 426 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 SPINK14Q6IE38 97 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 FAM111BQ6SJ93 734 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 TMEM107Q6UX40 140 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 FAM47EQ6ZV65 393 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 MISPQ8IVT2 679 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 FBXW8Q8N3Y1 598 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 ZNF527Q8NB42 609 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 ST6GALNAC3Q8NDV1 305 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 FAM13CQ8NE31 585 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 NUP43Q8NFH3 380 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 CLHC1Q8NHS4 586 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 NR4A3Q92570 626 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 KAT2AQ92830 837 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 PMM1Q92871 262 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 PPP1R36Q96LQ0 422 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 VSTM2LQ96N03 204 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 BARD1Q99728 777 aaKnown RBP9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 MESP1Q9BRJ9 268 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 EPN3Q9H201 632 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 FOLH1BQ9HBA9 442 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 ZCCHC3Q9NUD5 404 aaKnown RBP9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 EXD2Q9NVH0 621 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 STOML1Q9UBI4 398 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 SNX8Q9Y5X2 465 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 GPR45Q9Y5Y3 372 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 CPAMD8Q8IZJ3 1885 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 MYO18BQ8IUG5 2567 aa9.48□□□□□ -0.89
TRAFD1-208ENST00000552890 CFAP46Q8IYW2 2715 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 MYOCOSA0A1B0GUC4 107 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 FAM234BA2RU67 622 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 TMEM200CA6NKL6 621 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 H3BNH8 94 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 K7EM74 188 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 PEX1O43933 1283 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 REM1O75628 298 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 OR6B1O95007 311 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 PSMG1O95456 288 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 CT62P0C5K7 136 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 LAMP1P11279 417 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 HPGDP15428 266 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 ATP6V1C1P21283 382 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 UQCRC2P22695 453 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 MDH1P40925 334 aaKnown RBP9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 MC3RP41968 323 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 TRPC1P48995 793 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 DIO3P55073 304 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 PER3P56645 1201 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 KCNK10P57789 538 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 KCNJ2P63252 427 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 MRPS35P82673 323 aaKnown RBP9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 PLGLB1Q02325 96 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 SQLEQ14534 574 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 MAPRE2Q15555 327 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 CES4AQ5XG92 561 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 SZRD1Q7Z422 152 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 GALNTL5Q7Z4T8 443 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 SLC44A2Q8IWA5 706 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 GHDCQ8N2G8 530 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 CISD2Q8N5K1 135 aaKnown RBP9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 ZFP62Q8NB50 900 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 CATSPER1Q8NEC5 780 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 OR7G2Q8NG99 324 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 OR7A2PQ8NGA2 310 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 GOT1L1Q8NHS2 421 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 ADAMTS15Q8TE58 950 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 DIO2Q92813 273 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 SNRNP40Q96DI7 357 aaKnown RBP9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 SLC35A4Q96G79 324 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 ITCHQ96J02 903 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 ZNF597Q96LX8 424 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 CCDC115Q96NT0 180 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 OR52E6Q96RD3 313 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 LMF2Q9BU23 707 aaKnown RBP9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 DOHHQ9BU89 302 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 ACTRT3Q9BYD9 372 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 METTL7AQ9H8H3 244 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 ZNF395Q9H8N7 513 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 IL1RL2Q9HB29 575 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 CACYBPQ9HB71 228 aaKnown RBP9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 ZBTB20Q9HC78 741 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 POLE3Q9NRF9 147 aa9.47□□□□□ -0.89
TRAFD1-208ENST00000552890 CBLCQ9ULV8 474 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms