RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 OMA1Q96E52 524 aa11.88□□□□□ -0.51
SNRPF-203ENST00000551316 DHRS9Q9BPW9 319 aa11.88□□□□□ -0.51
SNRPF-203ENST00000551316 HEATR1Q9H583 2144 aaKnown RBP11.88□□□□□ -0.51
SNRPF-203ENST00000551316 DNAJC11Q9NVH1 559 aa11.88□□□□□ -0.51
SNRPF-203ENST00000551316 XPR1Q9UBH6 696 aa11.88□□□□□ -0.51
SNRPF-203ENST00000551316 DYRK1BQ9Y463 629 aa11.88□□□□□ -0.51
SNRPF-203ENST00000551316 PTGDR2Q9Y5Y4 395 aa11.88□□□□□ -0.51
SNRPF-203ENST00000551316 APRTP07741 180 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 EPHA1P21709 976 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 CTNNA1P35221 906 aaKnown RBP11.87□□□□□ -0.51
SNRPF-203ENST00000551316 SLC1A2P43004 574 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 HNRNPH2P55795 449 aaKnown RBP11.87□□□□□ -0.51
SNRPF-203ENST00000551316 COPS2P61201 443 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 UBA52P62987 128 aaKnown RBP11.87□□□□□ -0.51
SNRPF-203ENST00000551316 MAP4K2Q12851 820 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 STX1AQ16623 288 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 OCLNQ16625 522 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 PAQR3Q6TCH7 311 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 TMIGD1Q6UXZ0 262 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 TFAP2EQ6VUC0 442 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 SLCO4C1Q6ZQN7 724 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 USP43Q70EL4 1123 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 GALNT12Q8IXK2 581 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 RIT1Q92963 219 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 LINGO1Q96FE5 620 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 RBM18Q96H35 190 aaKnown RBP11.87□□□□□ -0.51
SNRPF-203ENST00000551316 GMPPAQ96IJ6 420 aaPredicted RBP11.87□□□□□ -0.51
SNRPF-203ENST00000551316 SNX18Q96RF0 628 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 CHP1Q99653 195 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 SLC6A7Q99884 636 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 KIFC1Q9BW19 673 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 ITPAQ9BY32 194 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 POTEKPQ9BYX7 375 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 RAB6BQ9NRW1 208 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 INTS10Q9NVR2 710 aaKnown RBP11.87□□□□□ -0.51
SNRPF-203ENST00000551316 MED29Q9NX70 200 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 ASIC3Q9UHC3 531 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 EFR3BQ9Y2G0 817 aa11.87□□□□□ -0.51
SNRPF-203ENST00000551316 A0A088AWK7 358 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 UQCRHLA0A096LP55 91 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 GOLGA8QA0A0J9YX86 632 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 OR2M5A3KFT3 312 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 GOLGA8OA6NCC3 632 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 GLOD5A6NK44 160 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 GOLGA8NF8WBI6 632 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 GOLGA8RI6L899 631 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 NDUFS8O00217 210 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 CLEC3AO75596 197 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 SLU7O95391 586 aaKnown RBP11.86□□□□□ -0.51
SNRPF-203ENST00000551316 FESP07332 822 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 PYGBP11216 843 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 CD22P20273 847 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 ZNF10P21506 573 aaPredicted RBP11.86□□□□□ -0.51
SNRPF-203ENST00000551316 IL32P24001 234 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 EDNRAP25101 427 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 LIMS1P48059 325 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 FABP6P51161 128 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 DVL1P1P54792 670 aaPredicted RBP11.86□□□□□ -0.51
SNRPF-203ENST00000551316 GAS1P54826 345 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 CTBP2P56545 445 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 RPP38P78345 283 aaKnown RBP11.86□□□□□ -0.51
SNRPF-203ENST00000551316 CCNIQ14094 377 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 RAET1LQ5VY80 246 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 NEPROQ6NW34 567 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 NUFIP2Q7Z417 695 aaKnown RBP11.86□□□□□ -0.51
SNRPF-203ENST00000551316 LUZP1Q86V48 1076 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 CCDC25Q86WR0 208 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 FBXL14Q8N1E6 418 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 EHD1Q9H4M9 534 aa11.86□□□□□ -0.51
SNRPF-203ENST00000551316 RPF2Q9H7B2 306 aaKnown RBP11.86□□□□□ -0.51
SNRPF-203ENST00000551316 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.86□□□□□ -0.51
SNRPF-203ENST00000551316 ZNF490Q9ULM2 529 aaPredicted RBP11.86□□□□□ -0.51
SNRPF-203ENST00000551316 E7EVH7 732 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 SAP18O00422 153 aaKnown RBP11.85□□□□□ -0.51
SNRPF-203ENST00000551316 SCELO95171 688 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 PLGP00747 810 aaPredicted RBP11.85□□□□□ -0.51
SNRPF-203ENST00000551316 AVPP01185 164 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 PRB2P02812 416 aaPredicted RBP11.85□□□□□ -0.51
SNRPF-203ENST00000551316 ALDOAP04075 364 aaKnown RBP11.85□□□□□ -0.51
SNRPF-203ENST00000551316 ZSCAN5DPP0CG00 497 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 GRK2P25098 689 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 GDF5P43026 501 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 CDKN2DP55273 166 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 NRG3P56975 720 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 TNFRSF17Q02223 184 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 FOXL1Q12952 345 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 KLF1Q13351 362 aaPredicted RBP11.85□□□□□ -0.51
SNRPF-203ENST00000551316 RCN2Q14257 317 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 STK11Q15831 433 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 RBM20Q5T481 1227 aaKnown RBP11.85□□□□□ -0.51
SNRPF-203ENST00000551316 RNF175Q8N4F7 328 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 HSD17B8Q92506 261 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 OR10A5Q9H207 317 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 CXorf21Q9HAI6 301 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 NGBQ9NPG2 151 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 ANO10Q9NW15 660 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 PDP1Q9P0J1 537 aaPredicted RBP11.85□□□□□ -0.51
SNRPF-203ENST00000551316 SPEF1Q9Y4P9 236 aa11.85□□□□□ -0.51
SNRPF-203ENST00000551316 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.85□□□□□ -0.51
SNRPF-203ENST00000551316 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms