RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 EEF1A1P5Q5VTE0 462 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 FNDC7Q5VTL7 733 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 ENPP6Q6UWR7 440 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 ANGPTL8Q6UXH0 198 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 PRR22Q8IZ63 422 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 ADCY4Q8NFM4 1077 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 RDH11Q8TC12 318 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 ZPLD1Q8TCW7 415 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 C16orf78Q8WTQ4 265 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 HGDQ93099 445 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 BTBD9Q96Q07 612 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 HBEGFQ99075 208 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 OSBPL11Q9BXB4 747 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 TXLNGYQ9BZA5 131 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 IQCGQ9H095 443 aaKnown RBP9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 MID1IP1Q9NPA3 183 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 RRAGDQ9NQL2 400 aaPredicted RBP9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 TAS2R7Q9NYW3 318 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 SENP1Q9P0U3 644 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 HEY2Q9UBP5 337 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 ITGB1BP2Q9UKP3 347 aa9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 MRPS18CQ9Y3D5 142 aaKnown RBP9.94□□□□□ -0.82
VTI1BP3-201ENST00000550220 ADGRG4Q8IZF6 3080 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 A0A087WV62 115 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 PRAMEF25A6NGN4 478 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 TTC36A6NLP5 189 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 GOLGA8RI6L899 631 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 COQ9O75208 318 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 ERN1O75460 977 aaKnown RBP9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 REM1O75628 298 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 LRATO95237 230 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 IL18BPO95998 194 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 CYP4B1P13584 511 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 CPN1P15169 458 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 PCSK2P16519 638 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 DDCP20711 480 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 CHMP24386 653 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 CRHR1P34998 444 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 OPRM1P35372 400 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 KIR2DL3P43628 341 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 ASCL1P50553 236 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 PNLIPRP2P54317 469 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 KRTAP10-9P60411 292 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 MRPS35P82673 323 aaKnown RBP9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 ZNF763Q0D2J5 394 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 IMPG1Q17R60 797 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 TCHHL1Q5QJ38 904 aaPredicted RBP9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 BICRALQ6AI39 1079 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 AAGABQ6PD74 315 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 ZYG11AQ6WRX3 759 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 SPNS3Q6ZMD2 512 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 TRIM46Q7Z4K8 759 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 TMEM200AQ86VY9 491 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 KIF18BQ86Y91 864 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 LIX1LQ8IVB5 337 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 FAM9CQ8IZT9 166 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 CCNYL1Q8N7R7 359 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 FAM83FQ8NEG4 500 aaPredicted RBP9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 RNASE6Q93091 150 aaKnown RBP9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 EXOSC8Q96B26 276 aaKnown RBP9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 TRIM44Q96DX7 344 aaPredicted RBP9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 C11orf24Q96F05 449 aaPredicted RBP9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 SLC35A4Q96G79 324 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 APIPQ96GX9 242 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 WDYHV1Q96HA8 205 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 ZFP3Q96NJ6 502 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 BBS4Q96RK4 519 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 NODALQ96S42 347 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 RHOXF2Q9BQY4 288 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 UGT2B28Q9BY64 529 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 ACBD3Q9H3P7 528 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 HHATLQ9HCP6 504 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 MIEF1Q9NQG6 463 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 TBK1Q9UHD2 729 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 MID2Q9UJV3 735 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 MRTO4Q9UKD2 239 aaKnown RBP9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 CAMK2AQ9UQM7 478 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 DTX4Q9Y2E6 619 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 L3MBTL1Q9Y468 752 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 TIMM22Q9Y584 194 aa9.93□□□□□ -0.82
VTI1BP3-201ENST00000550220 INTS1Q8N201 2190 aaKnown RBP9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 SPG11Q96JI7 2443 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 MBD3L4A6NDZ8 208 aaPredicted RBP9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 MBD3L3A6NE82 208 aaPredicted RBP9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 MBD3L5A6NJ08 208 aaPredicted RBP9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 GNB5O14775 395 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 UGT2B11O75310 529 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 RSL1D1O76021 490 aaKnown RBP9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 IFI6P09912 130 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 CD1EP15812 388 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 CHN1P15882 459 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 BMP5P22003 454 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 CTSSP25774 331 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 IL12BP29460 328 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 SRD5A2P31213 254 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 UQCRC1P31930 480 aa9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 PSMD4P55036 377 aaKnown RBP9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 RAE1P78406 368 aaKnown RBP9.92□□□□□ -0.82
VTI1BP3-201ENST00000550220 HMGCS1Q01581 520 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms