RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 FAM47E-STBD1D6RA91 191 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 PLIN3O60664 434 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 CDH16O75309 829 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 BCAS2O75934 225 aaPredicted RBP14.92□□□□□ -0.02
VPS29-207ENST00000549970 DRD5P21918 477 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 PTPN6P29350 595 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 CCT5P48643 541 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 WNT3P56703 355 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 ZNF763Q0D2J5 394 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 CCDC153Q494R4 210 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 EIPR1Q53HC9 387 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 WIPI1Q5MNZ9 446 aaPredicted RBP14.92□□□□□ -0.02
VPS29-207ENST00000549970 TIGD3Q6B0B8 471 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 SLC30A6Q6NXT4 461 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 FRMD7Q6ZUT3 714 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 SEM1Q6ZVN7 128 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 SAMD14Q8IZD0 417 aaPredicted RBP14.92□□□□□ -0.02
VPS29-207ENST00000549970 EIF1ADQ8N9N8 165 aaKnown RBP14.92□□□□□ -0.02
VPS29-207ENST00000549970 EPS8L3Q8TE67 593 aaKnown RBP14.92□□□□□ -0.02
VPS29-207ENST00000549970 TMBIM1Q969X1 311 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 C11orf24Q96F05 449 aaPredicted RBP14.92□□□□□ -0.02
VPS29-207ENST00000549970 BBS4Q96RK4 519 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 TIMP4Q99727 224 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 SHCBP1LQ9BZQ2 653 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 MCCC2Q9HCC0 563 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 ITGB1BP2Q9UKP3 347 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 GRID1Q9ULK0 1009 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 MAPRE3Q9UPY8 281 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 CAMK2AQ9UQM7 478 aa14.92□□□□□ -0.02
VPS29-207ENST00000549970 GPR55Q9Y2T6 319 aaPredicted RBP14.92□□□□□ -0.02
VPS29-207ENST00000549970 POLR3HQ9Y535 204 aaPredicted RBP14.92□□□□□ -0.02
VPS29-207ENST00000549970 MED12Q93074 2177 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 SERTM1A2A2V5 107 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 PRAMEF25A6NGN4 478 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 KDM4EB2RXH2 506 aaPredicted RBP14.91□□□□□ -0.02
VPS29-207ENST00000549970 SNPHO15079 494 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 TO15178 435 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 ICOSLGO75144 302 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 REM1O75628 298 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 CRHR1P34998 444 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 PTGDSP41222 190 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 CORO7P57737 925 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 C2orf80Q0P641 193 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 ERCC6LQ2NKX8 1250 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 SLC25A35Q3KQZ1 300 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 ACSF3Q4G176 576 aaPredicted RBP14.91□□□□□ -0.02
VPS29-207ENST00000549970 TMEM81Q6P7N7 255 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 YRDCQ86U90 279 aaKnown RBP14.91□□□□□ -0.02
VPS29-207ENST00000549970 TDRPQ86YL5 185 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 FAM9CQ8IZT9 166 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 CLYBLQ8N0X4 340 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 FAM83FQ8NEG4 500 aaPredicted RBP14.91□□□□□ -0.02
VPS29-207ENST00000549970 NTNG2Q96CW9 530 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 BTBD9Q96Q07 612 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 UGT2B28Q9BY64 529 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 TNFRSF12AQ9NP84 129 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 SIRT5Q9NXA8 310 aa14.91□□□□□ -0.02
VPS29-207ENST00000549970 HSPB2A8KAH6 182 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 AHRRA9YTQ3 701 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 COPEO14579 308 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 ERN1O75460 977 aaKnown RBP14.9□□□□□ -0.02
VPS29-207ENST00000549970 CT45A8P0DMV1 189 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 CT45A9P0DMV2 189 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 CPA3P15088 417 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 BMP7P18075 431 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 KRT4P19013 534 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 DDCP20711 480 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 MPIP34949 423 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 GSTM5P46439 218 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 DNAJB13P59910 316 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 NAA20P61599 178 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 MYBPHQ13203 477 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 SNTA1Q13424 505 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 CEBPEQ15744 281 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 HSPB2Q16082 182 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 CT45A2Q5DJT8 189 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 DCST1Q5T197 706 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 VASNQ6EMK4 673 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 NPSR1Q6W5P4 371 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 PM20D2Q8IYS1 436 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 C4orf33Q8N1A6 199 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 NAXEQ8NCW5 288 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 TNIP2Q8NFZ5 429 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 OR7G2Q8NG99 324 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 ABTB1Q969K4 478 aaPredicted RBP14.9□□□□□ -0.02
VPS29-207ENST00000549970 TMCO6Q96DC7 493 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 ERP27Q96DN0 273 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 VSTM2LQ96N03 204 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 COL21A1Q96P44 957 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 ADOQ96SZ5 270 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 ZNF559Q9BR84 538 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 PRDM14Q9GZV8 571 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 PPCSQ9HAB8 311 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 FOLH1BQ9HBA9 442 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 SERHLQ9NQF3 203 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 MIEF1Q9NQG6 463 aa14.9□□□□□ -0.02
VPS29-207ENST00000549970 CCDC168Q8NDH2 2452 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 OR6C70A6NIJ9 312 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 H3BQF6 201 aa14.89□□□□□ -0.03
VPS29-207ENST00000549970 PLOD3O60568 738 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms