RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 GAGE6Q13070 117 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 EFTUD2Q15029 972 aaKnown RBP eCLIP3.75□□□□□ -1.81
SCAF11-210ENST00000547654 ZSWIM7Q19AV6 140 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 HKDC1Q2TB90 917 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 XKR3Q5GH77 459 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 PDSS1Q5T2R2 415 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 TAF3Q5VWG9 929 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 PLPP4Q5VZY2 271 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 C16orf87Q6PH81 154 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 DPY19L2P2Q6ZN68 376 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 Q6ZRG5 221 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 PHC2Q8IXK0 858 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 CCDC36Q8IYA8 594 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 FAM89BQ8N5H3 189 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 ANKFN1Q8N957 763 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF383Q8NA42 475 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 ADAD2Q8NCV1 583 aaKnown RBP3.75□□□□□ -1.81
SCAF11-210ENST00000547654 SMPDL3AQ92484 453 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 SUSD6Q92537 303 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 P3H4Q92791 437 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 EMG1Q92979 244 aaKnown RBP3.75□□□□□ -1.81
SCAF11-210ENST00000547654 SENP5Q96HI0 755 aaPredicted RBP3.75□□□□□ -1.81
SCAF11-210ENST00000547654 IGSF21Q96ID5 467 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 ERGIC2Q96RQ1 377 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 NODALQ96S42 347 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 RHNO1Q9BSD3 238 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 LPAR2Q9HBW0 351 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 ZBTB20Q9HC78 741 aaPredicted RBP3.75□□□□□ -1.81
SCAF11-210ENST00000547654 MED17Q9NVC6 651 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 FKBP7Q9Y680 259 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 NPHP4O75161 1426 aaPredicted RBP3.75□□□□□ -1.81
SCAF11-210ENST00000547654 MYO5CQ9NQX4 1742 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 ATP7AQ04656 1500 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 KDM5DQ9BY66 1539 aa3.75□□□□□ -1.81
SCAF11-210ENST00000547654 TNRC18O15417 2968 aaPredicted RBP3.74□□□□□ -1.81
SCAF11-210ENST00000547654 IGLV5-45A0A087WSX0 123 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 PPIAL4CA0A0B4J2A2 164 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 LRRC30A6NM36 301 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 OR52A4PA6NMU1 304 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 SH2D1BO14796 132 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 ATP6V0E1O15342 81 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 LRRTM2O43300 516 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 KIAA0513O60268 411 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 LCMT2O60294 686 aaKnown RBP3.74□□□□□ -1.81
SCAF11-210ENST00000547654 TPST2O60704 377 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 CDK2AP2O75956 126 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 ANXA9O76027 345 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 SCGNO76038 276 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 IGHV4-39P01824 125 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 IGHEP01854 428 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 PPIAL4GP0DN37 164 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 SLC2A3P11169 496 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 FGF5P12034 268 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 UQCRBP14927 111 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 AMD1P17707 334 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 CYLC1P35663 651 aaPredicted RBP3.74□□□□□ -1.81
SCAF11-210ENST00000547654 HOXA1P49639 335 aaPredicted RBP3.74□□□□□ -1.81
SCAF11-210ENST00000547654 DVL1P1P54792 670 aaPredicted RBP3.74□□□□□ -1.81
SCAF11-210ENST00000547654 PRMT2P55345 433 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 TUBA1BP68363 451 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 DLG1Q12959 904 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 SRSF5Q13243 272 aaKnown RBP3.74□□□□□ -1.81
SCAF11-210ENST00000547654 KLF5Q13887 457 aaPredicted RBP3.74□□□□□ -1.81
SCAF11-210ENST00000547654 SF3B4Q15427 424 aaKnown RBP eCLIP3.74□□□□□ -1.818e-9■■■□□ 16.8
SCAF11-210ENST00000547654 C3AR1Q16581 482 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 LRIT3Q3SXY7 679 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 ACSF3Q4G176 576 aaPredicted RBP3.74□□□□□ -1.81
SCAF11-210ENST00000547654 SLC25A53Q5H9E4 307 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 CEP85LQ5SZL2 805 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 C1orf185Q5T7R7 199 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 OTUD6AQ7L8S5 288 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 DPY19L4Q7Z388 723 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 SMIM29Q86T20 159 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 ISCA2Q86U28 154 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 SATL1Q86VE3 508 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 LRRC75A-AS1Q8N1F1 130 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 CENPSQ8N2Z9 138 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 ARFGAP2Q8N6H7 521 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 SYT14Q8NB59 555 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 KBTBD8Q8NFY9 601 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 OR5AU1Q8NGC0 362 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 MIPOL1Q8TD10 442 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 ANKRD49Q8WVL7 239 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 SLC25A36Q96CQ1 311 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 PCED1BQ96HM7 432 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 ADGRG7Q96K78 797 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 LPAR4Q99677 370 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 OMDQ99983 421 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 MTG1Q9BT17 334 aaPredicted RBP3.74□□□□□ -1.81
SCAF11-210ENST00000547654 DCTN5Q9BTE1 182 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 LRRC1Q9BTT6 524 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 RAB11FIP5Q9BXF6 653 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 SHARPINQ9H0F6 387 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 MAGT1Q9H0U3 335 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 DHX33Q9H6R0 707 aaKnown RBP3.74□□□□□ -1.81
SCAF11-210ENST00000547654 EGLN3Q9H6Z9 239 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 EXO5Q9H790 373 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 ELOVL3Q9HB03 270 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 FANCEQ9HB96 536 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 SGK2Q9HBY8 427 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms