RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 OR1D2P34982 312 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 MAGEA3P43357 314 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 MC1RQ01726 317 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 OR4D1Q15615 310 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 GPR68Q15743 365 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 MAPK14Q16539 360 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 HBMQ6B0K9 141 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 LCN9Q8WX39 176 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 TMEM41AQ96HV5 264 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 SULT4A1Q9BR01 284 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF649Q9BS31 505 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 NTMT1Q9BV86 223 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 ATG5Q9H1Y0 275 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 MINDY3Q9H8M7 445 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 RHCGQ9UBD6 479 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 GGT3PA6NGU5 568 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 M0R129 80 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 RFXAPO00287 272 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 GAPDHSO14556 408 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-212ENST00000546744 OIP5O43482 229 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 JUNDP17535 347 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 CXCR1P25024 350 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 GZMKP49863 264 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 ERVPABLB-1P60509 514 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 ARHGAP1Q07960 439 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF616Q08AN1 781 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 MAMDC4Q6UXC1 1216 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 SSX9Q7RTT3 188 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 TMEM173Q86WV6 379 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-212ENST00000546744 GRAMD2AQ8IUY3 354 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 ESX1Q8N693 406 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF709Q8N972 641 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 FAM83FQ8NEG4 500 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-212ENST00000546744 OR4K1Q8NGD4 311 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 MYLIPQ8WY64 445 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 SMCO4Q9NRQ5 59 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 CA5BQ9Y2D0 317 aa12.18□□□□□ -0.46
PTCH1-212ENST00000546744 OR2A25A4D2G3 310 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 EFCAB7A8K855 629 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 LATO43561 262 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 CACNG3O60359 315 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 TP53P04637 393 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-212ENST00000546744 ETFAP13804 333 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 DDCP20711 480 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 IL4RP24394 825 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 S100A11P31949 105 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 TMEM35AQ53FP2 167 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 LPCAT3Q6P1A2 487 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 C12orf40Q86WS4 652 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 RASGRP3Q8IV61 690 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 OVCA2Q8WZ82 227 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 GIMAP5Q96F15 307 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 HIST1H2AAQ96QV6 131 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 SYT3Q9BQG1 590 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 NEURL2Q9BR09 285 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 E7EQ34 232 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 GOSR2O14653 212 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 ARPC1BO15143 372 aaKnown RBP12.17□□□□□ -0.46
PTCH1-212ENST00000546744 FABP7O15540 132 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 STBD1O95210 358 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 SCGB1D2O95969 90 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 AMY2AP04746 511 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 ACP2P11117 423 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 OR52B6Q8NGF0 335 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 RNF19AQ9NV58 838 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 ATG4BQ9Y4P1 393 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 ANKRD12Q6UB98 2062 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 ARL5CA6NH57 179 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 PIRO00625 290 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 GPR37L1O60883 481 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 CYP17A1P05093 508 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 GABRR2P28476 465 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 IDUAP35475 653 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 MTNR1BP49286 362 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF169Q14929 603 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-212ENST00000546744 TPGS2Q68CL5 300 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 CFAP77Q6ZQR2 320 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 HFE2Q6ZVN8 426 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 SLC16A9Q7RTY1 509 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 C6orf120Q7Z4R8 191 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.17□□□□□ -0.462e-6■■■■■ 64.7
PTCH1-212ENST00000546744 HOXD1Q9GZZ0 328 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 IFT22Q9H7X7 185 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 CARS2Q9HA77 564 aaKnown RBP12.17□□□□□ -0.46
PTCH1-212ENST00000546744 RPS10P5Q9NQ39 176 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 GRHPRQ9UBQ7 328 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 RGPD3A6NKT7 1758 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-212ENST00000546744 RGPD4Q7Z3J3 1758 aa12.17□□□□□ -0.46
PTCH1-212ENST00000546744 HYKKA2RU49 373 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 OR6C74A6NCV1 312 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 LRRC72A6NJI9 287 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 SLC38A8A6NNN8 435 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 ERI3O43414 337 aaKnown RBP12.16□□□□□ -0.46
PTCH1-212ENST00000546744 RAB3DO95716 219 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 TGM4P49221 684 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 OLIG2Q13516 323 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 RBMS2Q15434 407 aaKnown RBP12.16□□□□□ -0.46
PTCH1-212ENST00000546744 ADPRMQ3LIE5 342 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 SLC6A19Q695T7 634 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 PM20D1Q6GTS8 502 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms