RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 MRGPRGQ86SM5 289 aa14.05□□□□□ -0.16
SSH1-204ENST00000546697 OR7G2Q8NG99 324 aa14.05□□□□□ -0.16
SSH1-204ENST00000546697 SREK1Q8WXA9 508 aaKnown RBP14.05□□□□□ -0.16
SSH1-204ENST00000546697 EXOSC8Q96B26 276 aaKnown RBP14.05□□□□□ -0.16
SSH1-204ENST00000546697 AMDHD1Q96NU7 426 aa14.05□□□□□ -0.16
SSH1-204ENST00000546697 TP63Q9H3D4 680 aaPredicted RBP14.05□□□□□ -0.16
SSH1-204ENST00000546697 GLIPR2Q9H4G4 154 aa14.05□□□□□ -0.16
SSH1-204ENST00000546697 PTGDR2Q9Y5Y4 395 aa14.05□□□□□ -0.16
SSH1-204ENST00000546697 DCHS2Q6V1P9 2916 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 TTC36A6NLP5 189 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 FAM166BA8MTA8 275 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 G3V3Y1 287 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 TSPAN2O60636 221 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 HPNP05981 417 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 HOXD4P09016 255 aaPredicted RBP14.04□□□□□ -0.16
SSH1-204ENST00000546697 ENDOUP21128 410 aaKnown RBP14.04□□□□□ -0.16
SSH1-204ENST00000546697 ELAVL4P26378 380 aaKnown RBP14.04□□□□□ -0.16
SSH1-204ENST00000546697 ASMTP46597 345 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 SMSP52788 366 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 C21orf58P58505 322 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 KCNJ2P63252 427 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 PSG6Q00889 435 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 PLGLB1Q02325 96 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 MLC1Q15049 377 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 ZNF630Q2M218 657 aaPredicted RBP14.04□□□□□ -0.16
SSH1-204ENST00000546697 NHSL2Q5HYW2 709 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 PRAMEF20Q5VT98 475 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 SLC30A6Q6NXT4 461 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 LRRC34Q8IZ02 419 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 FAM13CQ8NE31 585 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 DIO2Q92813 273 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 OMA1Q96E52 524 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 ELP4Q96EB1 424 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 ZNF597Q96LX8 424 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 PPP3R2Q96LZ3 170 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 RILPQ96NA2 401 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 DOHHQ9BU89 302 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 REEP4Q9H6H4 257 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 MIEF1Q9NQG6 463 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 ACSS1Q9NUB1 689 aaPredicted RBP14.04□□□□□ -0.16
SSH1-204ENST00000546697 ASIC5Q9NY37 505 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 TAS2R9Q9NYW1 312 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 BCAP29Q9UHQ4 241 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 ZDHHC2Q9UIJ5 367 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.04□□□□□ -0.16
SSH1-204ENST00000546697 LIPGQ9Y5X9 500 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 APCP25054 2843 aa14.04□□□□□ -0.16
SSH1-204ENST00000546697 NOTCH2Q04721 2471 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 LRBAP50851 2863 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 A1L4Q6 167 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 TMEM114B3SHH9 223 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 TMEM233B4DJY2 109 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 UPK1AO00322 258 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 PIP5K1BO14986 540 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 COQ9O75208 318 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 ERN1O75460 977 aaKnown RBP14.03□□□□□ -0.16
SSH1-204ENST00000546697 ZWINTO95229 277 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 CELA3AP09093 270 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 LINC00032P0C843 101 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 BCKDHAP12694 445 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 DCTP40126 519 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 PNLIPRP2P54317 469 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 MPP2Q14168 576 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 EXOSC6Q5RKV6 272 aaKnown RBP14.03□□□□□ -0.16
SSH1-204ENST00000546697 SH2D4BQ5SQS7 431 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 TIGD3Q6B0B8 471 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 NPSR1Q6W5P4 371 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 TMEM64Q6YI46 380 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 ZCCHC23Q6ZST2 131 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 CD163Q86VB7 1156 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 KIRREL3Q8IZU9 778 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 MARVELD2Q8N4S9 558 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 PSMA8Q8TAA3 256 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 NEIL3Q8TAT5 605 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 KAT2AQ92830 837 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 BBS4Q96RK4 519 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 TREX2Q9BQ50 279 aaPredicted RBP14.03□□□□□ -0.16
SSH1-204ENST00000546697 LMF2Q9BU23 707 aaKnown RBP14.03□□□□□ -0.16
SSH1-204ENST00000546697 DEFB127Q9H1M4 99 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 FOLH1BQ9HBA9 442 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 B4GALT7Q9UBV7 327 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 ATP6V1HQ9UI12 483 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 C15orf41Q9Y2V0 281 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 PHF3Q92576 2039 aaKnown RBP14.03□□□□□ -0.16
SSH1-204ENST00000546697 FBN2P35556 2912 aa14.03□□□□□ -0.16
SSH1-204ENST00000546697 TRGV5A0A0B4J1U4 118 aa14.02□□□□□ -0.17
SSH1-204ENST00000546697 SNPHO15079 494 aa14.02□□□□□ -0.17
SSH1-204ENST00000546697 WDR1O75083 606 aa14.02□□□□□ -0.17
SSH1-204ENST00000546697 UGT2B11O75310 529 aa14.02□□□□□ -0.17
SSH1-204ENST00000546697 LYPLA1O75608 230 aaPredicted RBP14.02□□□□□ -0.17
SSH1-204ENST00000546697 SERPINE1P05121 402 aa14.02□□□□□ -0.17
SSH1-204ENST00000546697 ESRRAP11474 423 aaPredicted RBP14.02□□□□□ -0.17
SSH1-204ENST00000546697 GRK2P25098 689 aa14.02□□□□□ -0.17
SSH1-204ENST00000546697 PTPN6P29350 595 aa14.02□□□□□ -0.17
SSH1-204ENST00000546697 NTSP30990 170 aa14.02□□□□□ -0.17
SSH1-204ENST00000546697 CDK9P50750 372 aaKnown RBP14.02□□□□□ -0.17
SSH1-204ENST00000546697 PLCXD2Q0VAA5 305 aa14.02□□□□□ -0.17
SSH1-204ENST00000546697 CYP27C1Q4G0S4 372 aa14.02□□□□□ -0.17
SSH1-204ENST00000546697 GXYLT1Q4G148 440 aa14.02□□□□□ -0.17
SSH1-204ENST00000546697 C6orf136Q5SQH8 315 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms