RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 A0A0B4J293 547 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 A0A1W2PR48 441 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 MAN2B1O00754 1011 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 SLC9A3R1O14745 358 aaPredicted RBP14.86□□□□□ -0.03
LDLR-204ENST00000545707 ERI3O43414 337 aaKnown RBP14.86□□□□□ -0.03
LDLR-204ENST00000545707 FGBP02675 491 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 SLC35G4P0C7Q5 338 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 LIMS3P0CW19 117 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 LIMS4P0CW20 117 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 ACP5P13686 325 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 S100A1P23297 94 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 WASP42768 502 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 MTNR1AP48039 350 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 TAS2R38P59533 333 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 TAS2R41P59536 307 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 BNC1Q01954 994 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 CHRNEQ04844 493 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 TCEA2Q15560 299 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 WSCD2Q2TBF2 565 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 PLK5Q496M5 336 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 SLC30A6Q6NXT4 461 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 B3GLCTQ6Y288 498 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 ANKK1Q8NFD2 765 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 SUN3Q8TAQ9 357 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 UBASH3BQ8TF42 649 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 RNF31Q96EP0 1072 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 MSLNLQ96KJ4 702 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 PRRC1Q96M27 445 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 INSM2Q96T92 566 aaPredicted RBP14.86□□□□□ -0.03
LDLR-204ENST00000545707 TMED9Q9BVK6 235 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 HDHD5Q9BXW7 423 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 SYNPO2LQ9H987 977 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 SEMA4GQ9NTN9 838 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 NPAP1Q9NZP6 1156 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 FAM170BA6NMN3 283 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 CENPXA8MT69 81 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 PLA2G10O15496 165 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 HOXC11O43248 304 aaPredicted RBP14.85□□□□□ -0.03
LDLR-204ENST00000545707 ACP2P11117 423 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 TRHRP34981 398 aaPredicted RBP14.85□□□□□ -0.03
LDLR-204ENST00000545707 BCL6P41182 706 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 SLC9A3P48764 834 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 RAB8AP61006 207 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 ARHGAP19Q14CB8 494 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.85□□□□□ -0.035e-6■□□□□ 10.9
LDLR-204ENST00000545707 TMEM52BQ4KMG9 183 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 ENTPD8Q5MY95 495 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 RNLSQ5VYX0 342 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 CD300LDQ6UXZ3 194 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 DGLUCYQ7Z3D6 616 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 ETFBKMTQ8IXQ9 262 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 NATD1Q8N6N6 113 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 NLGN4YQ8NFZ3 816 aaPredicted RBP14.85□□□□□ -0.03
LDLR-204ENST00000545707 TMEM163Q8TC26 289 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 WFIKKN2Q8TEU8 576 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 JPH3Q8WXH2 748 aaPredicted RBP14.85□□□□□ -0.03
LDLR-204ENST00000545707 OR2B2Q9GZK3 357 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 TBC1D17Q9HA65 648 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 DEC1Q9P2X7 70 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 NDRG2Q9UN36 371 aaKnown RBP14.85□□□□□ -0.03
LDLR-204ENST00000545707 KCNK6Q9Y257 313 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 REV3LO60673 3130 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 DOCK9Q9BZ29 2069 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 CCDC182A6NF36 153 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 OR52A4PA6NMU1 304 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 DVL2O14641 736 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 RGS13O14921 159 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 PRODHO43272 600 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 PCDH8O95206 1070 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 FGF19O95750 216 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 ADH1CP00326 375 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 DDX5P17844 614 aaKnown RBP14.85□□□□□ -0.03
LDLR-204ENST00000545707 KIR2DL3P43628 341 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 AVPR1BP47901 424 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 RPA4Q13156 261 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 KLHL22Q53GT1 634 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 C3orf38Q5JPI3 329 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 PIP5KL1Q5T9C9 394 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 DDI2Q5TDH0 399 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 SLC27A4Q6P1M0 643 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 XKRXQ6PP77 449 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 OR2A1Q8NGT9 310 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 TEX47Q8TBZ9 253 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 PRRG3Q9BZD7 231 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 MCOLN1Q9GZU1 580 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 SLC22A4Q9H015 551 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 PAQR5Q9NXK6 330 aaPredicted RBP14.85□□□□□ -0.03
LDLR-204ENST00000545707 CXXC1Q9P0U4 656 aaPredicted RBP14.85□□□□□ -0.03
LDLR-204ENST00000545707 SLC27A6Q9Y2P4 619 aa14.85□□□□□ -0.03
LDLR-204ENST00000545707 PRR23AA6NEV1 266 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 B4DXG7 233 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 POLR1CO15160 346 aaPredicted RBP14.84□□□□□ -0.03
LDLR-204ENST00000545707 SLC2A10O95528 541 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 ACADMP11310 421 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 GNSP15586 552 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 NTSP30990 170 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 CTNNB1P35222 781 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 IL12RB1P42701 662 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 KHKP50053 298 aa14.84□□□□□ -0.03
LDLR-204ENST00000545707 CD83Q01151 205 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms