RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ZNF845Q96IR2 970 aaPredicted RBP13.27□□□□□ -0.29
RTN3-214ENST00000545432 NAP1L3Q99457 506 aaPredicted RBP13.27□□□□□ -0.29
RTN3-214ENST00000545432 NSMCE4AQ9NXX6 385 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 FBXL2Q9UKC9 423 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 CES1P1Q9UKY3 287 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 ZNF175Q9Y473 711 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 PCDHGA11Q9Y5H2 935 aa13.27□□□□□ -0.29
RTN3-214ENST00000545432 PRAMEF25A6NGN4 478 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 OR6C70A6NIJ9 312 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 SLC22A20A6NK97 555 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 FOXE1O00358 373 aaPredicted RBP13.26□□□□□ -0.29
RTN3-214ENST00000545432 TP73O15350 636 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 PEPDP12955 493 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 PORP16435 677 aaPredicted RBP13.26□□□□□ -0.29
RTN3-214ENST00000545432 IL11P20809 199 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 PIK3R1P27986 724 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 THBS2P35442 1172 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 IDUAP35475 653 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 PPICP45877 212 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 XKP51811 444 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 GAS1P54826 345 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 KBTBD12Q3ZCT8 623 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 HP1BP3Q5SSJ5 553 aaPredicted RBP13.26□□□□□ -0.29
RTN3-214ENST00000545432 LIPJQ5W064 366 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 DNAJC14Q6Y2X3 702 aaPredicted RBP13.26□□□□□ -0.29
RTN3-214ENST00000545432 ISCA2Q86U28 154 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 CNEP1R1Q8N9A8 125 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 MAPK1IP1LQ8NDC0 245 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 LILRB1Q8NHL6 650 aaPredicted RBP13.26□□□□□ -0.29
RTN3-214ENST00000545432 WDR20Q8TBZ3 569 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 RDH11Q8TC12 318 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 ACTRT1Q8TDG2 376 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 REPS1Q96D71 796 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 DTNBP1Q96EV8 351 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 SLC35A4Q96G79 324 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 SFXN2Q96NB2 322 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 ATOH8Q96SQ7 321 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 MTERF1Q99551 399 aaKnown RBP13.26□□□□□ -0.29
RTN3-214ENST00000545432 ITPAQ9BY32 194 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 OR10A4Q9H209 315 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 SMYD2Q9NRG4 433 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 PLSCR4Q9NRQ2 329 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 KLRF1Q9NZS2 232 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 WHRNQ9P202 907 aa13.26□□□□□ -0.29
RTN3-214ENST00000545432 CR1P17927 2039 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 E7ESA3 106 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 PGRMC1O00264 195 aaKnown RBP13.25□□□□□ -0.29
RTN3-214ENST00000545432 PHF1O43189 567 aaPredicted RBP13.25□□□□□ -0.29
RTN3-214ENST00000545432 UGDHO60701 494 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 ABCB7O75027 752 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 CBX7O95931 251 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 ATP1B1P05026 303 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 DANCRP0C864 163 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 CNTFP26441 200 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 PPP1R7Q15435 360 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 CYP20A1Q6UW02 462 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 P4HA3Q7Z4N8 544 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 STAG3L4Q8TBR4 150 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 TMCO6Q96DC7 493 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 ZC3HAV1LQ96H79 300 aaKnown RBP13.25□□□□□ -0.29
RTN3-214ENST00000545432 GPR22Q99680 433 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 CAB39LQ9H9S4 337 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 NUDT4Q9NZJ9 180 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 MAT2BQ9NZL9 334 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 OPTCQ9UBM4 332 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 GPR55Q9Y2T6 319 aaPredicted RBP13.25□□□□□ -0.29
RTN3-214ENST00000545432 JRKLQ9Y4A0 524 aa13.25□□□□□ -0.29
RTN3-214ENST00000545432 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.24□□□□□ -0.292e-17■■■■□ 24.5
RTN3-214ENST00000545432 PHGDHO43175 533 aaKnown RBP13.24□□□□□ -0.29
RTN3-214ENST00000545432 SEMA3DO95025 777 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 TP53P04637 393 aaPredicted RBP13.24□□□□□ -0.29
RTN3-214ENST00000545432 FAM157CP0CG43 387 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 MTHFD2P13995 350 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 EPB42P16452 691 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 DPP4P27487 766 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 EMDP50402 254 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 SUCLG1P53597 346 aaKnown RBP13.24□□□□□ -0.29
RTN3-214ENST00000545432 EEFSECP57772 596 aaKnown RBP13.24□□□□□ -0.29
RTN3-214ENST00000545432 RPS4XP62701 263 aaKnown RBP13.24□□□□□ -0.29
RTN3-214ENST00000545432 PLCXD2Q0VAA5 305 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 DDX39BQ13838 428 aaKnown RBP13.24□□□□□ -0.29
RTN3-214ENST00000545432 CHRFAM7AQ494W8 412 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 ANKRD34AQ69YU3 496 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 FAM111BQ6SJ93 734 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 STAC2Q6ZMT1 411 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 CYS1Q717R9 158 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 FAM214BQ7L5A3 538 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 NUDT13Q86X67 352 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 FADS6Q8N9I5 356 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 L3MBTL4Q8NA19 623 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 TSPAN17Q96FV3 270 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 TMEM160Q9NX00 188 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 ASIC3Q9UHC3 531 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 ADAM29Q9UKF5 820 aa13.24□□□□□ -0.29
RTN3-214ENST00000545432 A0A096LNT2 108 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 LINC01387J3KSC0 135 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 TSPAN2O60636 221 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 NT5EP21589 574 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 SLC12A2P55011 1212 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 DSCR4P56555 118 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms