RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 CLDN14O95500 239 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 IGHG3P01860 377 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 SERPINE1P05121 402 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 PRPS1L1P21108 318 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 MST1P26927 711 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 GDF1P27539 372 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 ABCD3P28288 659 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 CHRNB4P30926 498 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 SSTR4P31391 388 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 SERPINB4P48594 390 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 ANXA11P50995 505 aaKnown RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 PNLIPRP2P54317 469 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 EEFSECP57772 596 aaKnown RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 GPR85P60893 370 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 TXNL4AP83876 142 aaKnown RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 PMP22Q01453 160 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 HMGCS1Q01581 520 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNF155Q12901 538 aaPredicted RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 RCAN2Q14206 197 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 GANABQ14697 944 aaKnown RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 TOMM20Q15388 145 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 HSPB2Q16082 182 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 PRICKLE4Q2TBC4 344 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 GALNTL6Q49A17 601 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 SH2D4BQ5SQS7 431 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNF468Q5VIY5 522 aaPredicted RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 B3GNT6Q6ZMB0 384 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 SH2D5Q6ZV89 423 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 LARP4Q71RC2 724 aaKnown RBP eCLIP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 RPS27LQ71UM5 84 aaKnown RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 MDGA2Q7Z553 956 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 CD163Q86VB7 1156 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 MISPQ8IVT2 679 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 SIAH3Q8IW03 269 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 RNF175Q8N4F7 328 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 FNDC5Q8NAU1 212 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNF527Q8NB42 609 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 OR52R1Q8NGF1 315 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 GOT1L1Q8NHS2 421 aaPredicted RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 RAB3IL1Q8TBN0 382 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 MZB1Q8WU39 189 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 MOAP1Q96BY2 351 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 PGM2Q96G03 612 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 APIPQ96GX9 242 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 CCDC120Q96HB5 630 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 TMEM41AQ96HV5 264 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 RILPQ96NA2 401 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 COL21A1Q96P44 957 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 BTBD9Q96Q07 612 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 HBEGFQ99075 208 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 G6PC3Q9BUM1 346 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 OSBPL11Q9BXB4 747 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 ANGPTL4Q9BY76 406 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 EPB41L4BQ9H329 900 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 LIN28AQ9H9Z2 209 aaKnown RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 NEUROD4Q9HD90 331 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 FANCFQ9NPI8 374 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 KCNJ16Q9NPI9 418 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 NOP53Q9NZM5 478 aaKnown RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 SH3BP4Q9P0V3 963 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNF225Q9UK10 706 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 ZNF223Q9UK11 482 aaPredicted RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 CES1P1Q9UKY3 287 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 RAB21Q9UL25 225 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 FAF1Q9UNN5 650 aaPredicted RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 ABCG2Q9UNQ0 655 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 FIS1Q9Y3D6 152 aa5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 CHCHD2Q9Y6H1 151 aaPredicted RBP5.16□□□□□ -1.58
CLSTN3-215ENST00000544584 UQCRHLA0A096LP55 91 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 C15orf38-AP3S2A0A0A6YYH1 394 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 PRAMEF25A6NGN4 478 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 TMEM200CA6NKL6 621 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 DUXAA6NLW8 204 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 MYO1GB0I1T2 1018 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 NPIPA2E9PIF3 369 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 NPIPA3F8WFD2 350 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 PPP6CO00743 305 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 DVL2O14641 736 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 PRKNO60260 465 aaPredicted RBP5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 TBX19O60806 448 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 SPAG7O75391 227 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 PRKRAO75569 313 aaKnown RBP5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 PDE9AO76083 593 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 GLSO94925 669 aaPredicted RBP5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 AGR2O95994 175 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 ACTL6AO96019 429 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 IL2RAP01589 272 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 BPGMP07738 259 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 ABCB1P08183 1280 aaPredicted RBP5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 LINC00032P0C843 101 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 CCL3P10147 92 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 PRF1P14222 555 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 ATP6V1C1P21283 382 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 GPX3P22352 226 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 CHMP24386 653 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 ACVR2AP27037 513 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 MSX1P28360 303 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 HTR1EP28566 365 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 CASP3P42574 277 aa5.15□□□□□ -1.59
CLSTN3-215ENST00000544584 MAGEA5P43359 124 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms