RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 PCDHGB3Q9Y5G1 929 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 ENPP4Q9Y6X5 453 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 TMEM247A6NEH6 219 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 SIGLEC6O43699 453 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 OR10H2O60403 315 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 MAN1A2O60476 641 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 SOX14O95416 240 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 ARFIP1P53367 373 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 MAPK10P53779 464 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 APOFQ13790 326 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 MAPK14Q16539 360 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 ZC3H12BQ5HYM0 836 aaKnown RBP12.78□□□□□ -0.36
HCFC2-202ENST00000544223 TCEAL6Q6IPX3 200 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 ZNF574Q6ZN55 896 aaPredicted RBP12.78□□□□□ -0.36
HCFC2-202ENST00000544223 C1orf210Q8IVY1 113 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 OR2L13Q8N349 312 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 BPIFB6Q8NFQ5 453 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 OR4C15Q8NGM1 316 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 GIPC3Q8TF64 312 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 PHF10Q8WUB8 498 aaKnown RBP12.78□□□□□ -0.36
HCFC2-202ENST00000544223 TCEAL3Q969E4 200 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 ZNF607Q96SK3 696 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 ACTRT3Q9BYD9 372 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 ROGDIQ9GZN7 287 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 AMBNQ9NP70 447 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 PILRBQ9UKJ0 227 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 CCDC160A6NGH7 325 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 OR2B3O76000 313 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 HPRP00739 348 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 PAX7P23759 505 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 ARRB1P49407 418 aaPredicted RBP12.77□□□□□ -0.37
HCFC2-202ENST00000544223 ARL4DP49703 201 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 STX4Q12846 297 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 NPTX1Q15818 432 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF311Q5JNZ3 666 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 FHL5Q5TD97 284 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 RBM44Q6ZP01 1051 aaKnown RBP12.77□□□□□ -0.37
HCFC2-202ENST00000544223 C8orf59Q8N0T1 100 aaPredicted RBP12.77□□□□□ -0.37
HCFC2-202ENST00000544223 EID2Q8N6I1 236 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF321PQ8N8H1 164 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 OR52R1Q8NGF1 315 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 OR51Q1Q8NH59 317 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 GPR151Q8TDV0 419 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 ZDHHC12Q96GR4 267 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF354BQ96LW1 612 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 GAREM1Q9H706 876 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 MS4A12Q9NXJ0 267 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 C3orf18Q9UK00 162 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 ORC6Q9Y5N6 252 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 H3BSA7 217 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 NUDT21O43809 227 aaKnown RBP12.77□□□□□ -0.37
HCFC2-202ENST00000544223 IFNA14P01570 189 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 GLB1P16278 677 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 DDX5P17844 614 aaKnown RBP12.77□□□□□ -0.37
HCFC2-202ENST00000544223 POU1F1P28069 291 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 RAB38P57729 211 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 ISL1P61371 349 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 DBPQ10586 325 aaPredicted RBP12.77□□□□□ -0.37
HCFC2-202ENST00000544223 VWA2Q5GFL6 755 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 ARHGAP22Q7Z5H3 698 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 AQP11Q8NBQ7 271 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 CHDHQ8NE62 594 aaPredicted RBP12.77□□□□□ -0.37
HCFC2-202ENST00000544223 SFXN5Q8TD22 340 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 MS4A4EQ96PG1 132 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 ALPK1Q96QP1 1244 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 LMF1Q96S06 567 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 EPYCQ99645 322 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 CNPPD1Q9BV87 410 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 ALOXE3Q9BYJ1 711 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 PAK1IP1Q9NWT1 392 aaPredicted RBP12.77□□□□□ -0.37
HCFC2-202ENST00000544223 KCNE5Q9UJ90 142 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 PLCL2Q9UPR0 1127 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 CLDN16Q9Y5I7 305 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 SPACA6W5XKT8 324 aa12.77□□□□□ -0.37
HCFC2-202ENST00000544223 LY6G6EA0A0G2JKS1 128 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 CPSF4LA6NMK7 179 aaKnown RBP12.76□□□□□ -0.37
HCFC2-202ENST00000544223 CBX7O95931 251 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 GKN3PP0CG01 181 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 TRHRP34981 398 aaPredicted RBP12.76□□□□□ -0.37
HCFC2-202ENST00000544223 RPP38P78345 283 aaKnown RBP12.76□□□□□ -0.37
HCFC2-202ENST00000544223 SIGLEC14Q08ET2 396 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 NEDD8Q15843 81 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 MICAQ29983 383 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 FAHD1Q6P587 224 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 BHLHB9Q6PI77 547 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 FRRS1Q6ZNA5 592 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 THAP5Q7Z6K1 395 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF605Q86T29 641 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 TAGAPQ8N103 731 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 SLC7A13Q8TCU3 470 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 GTPBP2Q9BX10 602 aaKnown RBP12.76□□□□□ -0.37
HCFC2-202ENST00000544223 NECTIN3Q9NQS3 549 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 THSD1Q9NS62 852 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 U3KQA8 63 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 KIF26BQ2KJY2 2108 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 TNRC6BQ9UPQ9 1833 aaKnown RBP12.76□□□□□ -0.37
HCFC2-202ENST00000544223 H0YAE9 185 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 ADAMDEC1O15204 470 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 SERPINB7O75635 380 aa12.76□□□□□ -0.37
HCFC2-202ENST00000544223 ATP1B1P05026 303 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms