RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 LGI4Q8N135 537 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 SLC5A8Q8N695 610 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 ZNF615Q8N8J6 731 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 APCDD1LQ8NCL9 501 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 TNIP2Q8NFZ5 429 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 OR10A6Q8NH74 314 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 NUBPLQ8TB37 319 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 SLC22A8Q8TCC7 542 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 GPR151Q8TDV0 419 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 IMMP1LQ96LU5 166 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 OR7D2Q96RA2 312 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 STACQ99469 402 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 SPATA9Q9BWV2 254 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 TRIM4Q9C037 500 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 SEMA4CQ9C0C4 833 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 WWTR1Q9GZV5 400 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 CACYBPQ9HB71 228 aaKnown RBP11.04□□□□□ -0.64
DDB1-223ENST00000543658 GPATCH2Q9NW75 528 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 ABI3Q9P2A4 366 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 P2RX2Q9UBL9 471 aa11.04□□□□□ -0.64
DDB1-223ENST00000543658 MRTO4Q9UKD2 239 aaKnown RBP11.04□□□□□ -0.64
DDB1-223ENST00000543658 PRPF19Q9UMS4 504 aaKnown RBP11.04□□□□□ -0.64
DDB1-223ENST00000543658 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 FRG2CA6NGY1 282 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 C5orf58C9J3I9 102 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 ASNA1O43681 348 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 GMNNO75496 209 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 PSMG1O95456 288 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 AK1P00568 194 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 CLPSP04118 112 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 OR12D1P0DN82 309 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 ACP2P11117 423 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 ETFAP13804 333 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 GPX2P18283 190 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 NR0B1P51843 470 aaKnown RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 PSMD4P55036 377 aaKnown RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 TMPRSS3P57727 454 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 POU6F2P78424 691 aaPredicted RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 NNATQ16517 81 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 JMJD6Q6NYC1 403 aaPredicted RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 ERICH5Q6P6B1 374 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 ZNF771Q7L3S4 317 aaPredicted RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 WDR53Q7Z5U6 358 aaPredicted RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 YTHDF3Q7Z739 585 aaKnown RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 IFNEQ86WN2 208 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 SLC44A2Q8IWA5 706 aaPredicted RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 TAGAPQ8N103 731 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 KIF2BQ8N4N8 673 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 HORMAD2Q8N7B1 307 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 SIMC1Q8NDZ2 872 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 OR5D16Q8NGK9 328 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 FBXO27Q8NI29 283 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 MIPOL1Q8TD10 442 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 ELP5Q8TE02 316 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 THAP3Q8WTV1 239 aaPredicted RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 XAGE5Q8WWM1 108 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 TMEM125Q96AQ2 219 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 GIMAP5Q96F15 307 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 OTUB1Q96FW1 271 aaPredicted RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 THOC3Q96J01 351 aaKnown RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 LCORQ96JN0 433 aaPredicted RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 CDRT15Q96T59 188 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 KCTD14Q9BQ13 255 aaPredicted RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 GPATCH1Q9BRR8 931 aaKnown RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 LMF2Q9BU23 707 aaKnown RBP11.03□□□□□ -0.64
DDB1-223ENST00000543658 TRIM8Q9BZR9 551 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 PIGUQ9H490 435 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 ALG2Q9H553 416 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 EPS8L2Q9H6S3 715 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 DUSP22Q9NRW4 184 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 TAS2R1Q9NYW7 299 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 TEKT2Q9UIF3 430 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 ERVK-11Q9UQG0 969 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 ANGPT4Q9Y264 503 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 RAXQ9Y2V3 346 aa11.03□□□□□ -0.64
DDB1-223ENST00000543658 WDFY3Q8IZQ1 3526 aa11.02□□□□□ -0.64
DDB1-223ENST00000543658 PCSK5Q92824 1860 aa11.02□□□□□ -0.64
DDB1-223ENST00000543658 A8MUI8 341 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 FAM220BPB1ANY3 271 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 GSTA4O15217 222 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 ACOX3O15254 700 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 DNAJC8O75937 253 aaPredicted RBP11.02□□□□□ -0.65
DDB1-223ENST00000543658 BCHEP06276 602 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 CELA2AP08217 269 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 NR2F1P10589 423 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 ITGAMP11215 1152 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 ATP6V1C1P21283 382 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 IL12BP29460 328 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 GABRA3P34903 492 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 SOX18P35713 384 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 CPOXP36551 454 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 PPICP45877 212 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 RFX3P48380 749 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 TMED10P49755 219 aaKnown RBP11.02□□□□□ -0.65
DDB1-223ENST00000543658 GPR143P51810 404 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 EEFSECP57772 596 aaKnown RBP11.02□□□□□ -0.65
DDB1-223ENST00000543658 NCALDP61601 193 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 PLCXD2Q0VAA5 305 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 DUSP8Q13202 625 aa11.02□□□□□ -0.65
DDB1-223ENST00000543658 SELPLGQ14242 412 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms