RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 GMEB1Q9Y692 573 aa11.28□□□□□ -0.6
DDX55-210ENST00000543016 DOCK10Q96BY6 2186 aa11.28□□□□□ -0.6
DDX55-210ENST00000543016 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 RNF103-CHMP3A0A140T963 221 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 TMEM200CA6NKL6 621 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 C9JVG2 144 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 MASP2O00187 686 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 ASNA1O43681 348 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 DPM1O60762 260 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 ITGA10O75578 1167 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 KCNH1O95259 989 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 CAPN3P20807 821 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 EFNA1P20827 205 aaPredicted RBP11.27□□□□□ -0.61
DDX55-210ENST00000543016 PTGER1P34995 402 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 SOAT1P35610 550 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 CHI3L1P36222 383 aaPredicted RBP11.27□□□□□ -0.61
DDX55-210ENST00000543016 MAP3K8P41279 467 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 CYB561P49447 251 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 HLCSP50747 726 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 PRKAG1P54619 331 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 PSMD4P55036 377 aaKnown RBP11.27□□□□□ -0.61
DDX55-210ENST00000543016 RPP38P78345 283 aaKnown RBP11.27□□□□□ -0.61
DDX55-210ENST00000543016 ZNF155Q12901 538 aaPredicted RBP11.27□□□□□ -0.61
DDX55-210ENST00000543016 MFSD12Q6NUT3 480 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 CDC73Q6P1J9 531 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 C6orf120Q7Z4R8 191 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 TMEM156Q8N614 296 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 DOK4Q8TEW6 326 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 GIMAP5Q96F15 307 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 CRELD1Q96HD1 420 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 MAGED4Q96JG8 741 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 UBL7Q96S82 380 aaPredicted RBP11.27□□□□□ -0.61
DDX55-210ENST00000543016 UTP23Q9BRU9 249 aaKnown RBP11.27□□□□□ -0.61
DDX55-210ENST00000543016 SLC35A5Q9BS91 424 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 CCDC106Q9BWC9 280 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 ITPAQ9BY32 194 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 ACTRT3Q9BYD9 372 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 TRIM4Q9C037 500 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 Q9N2J8 555 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 GPATCH2Q9NW75 528 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 THUMPD1Q9NXG2 353 aaKnown RBP11.27□□□□□ -0.61
DDX55-210ENST00000543016 CORO2BQ9UQ03 480 aa11.27□□□□□ -0.61
DDX55-210ENST00000543016 NUP214P35658 2090 aaPredicted RBP11.26□□□□□ -0.61
DDX55-210ENST00000543016 OR5H15A6NDH6 313 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 WWP2O00308 870 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 PRKNO60260 465 aaPredicted RBP11.26□□□□□ -0.61
DDX55-210ENST00000543016 OR2J2O76002 312 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 NKX2-2O95096 273 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 AK1P00568 194 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 HMGN2P05204 90 aaKnown RBP11.26□□□□□ -0.61
DDX55-210ENST00000543016 ALOX5P09917 674 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 CT45A8P0DMV1 189 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 CT45A9P0DMV2 189 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 LCN1P31025 176 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 NR0B1P51843 470 aaKnown RBP11.26□□□□□ -0.61
DDX55-210ENST00000543016 ARG2P78540 354 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 PSG6Q00889 435 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 MMEL1Q495T6 779 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 LACTB2Q53H82 288 aaPredicted RBP11.26□□□□□ -0.61
DDX55-210ENST00000543016 CT45A2Q5DJT8 189 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 EXOSC6Q5RKV6 272 aaKnown RBP11.26□□□□□ -0.61
DDX55-210ENST00000543016 SAXO2Q658L1 398 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 B3GNTL1Q67FW5 361 aaPredicted RBP11.26□□□□□ -0.61
DDX55-210ENST00000543016 SLC2A7Q6PXP3 512 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 LINC00696Q6ZRV3 163 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 GK5Q6ZS86 529 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 SZRD1Q7Z422 152 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 SLC34A3Q8N130 599 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 BEST3Q8N1M1 668 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 GOLM1Q8NBJ4 401 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 ADAMTS15Q8TE58 950 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 THAP3Q8WTV1 239 aaPredicted RBP11.26□□□□□ -0.61
DDX55-210ENST00000543016 ASB15Q8WXK1 588 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 RASL10BQ96S79 203 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 SECISBP2Q96T21 854 aaKnown RBP11.26□□□□□ -0.61
DDX55-210ENST00000543016 NPAS2Q99743 824 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 SH3GL1Q99961 368 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 INPP5KQ9BT40 448 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 PAIP1Q9H074 479 aaKnown RBP11.26□□□□□ -0.61
DDX55-210ENST00000543016 NXF5Q9H1B4 397 aaKnown RBP11.26□□□□□ -0.61
DDX55-210ENST00000543016 PIGUQ9H490 435 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 ERVK-11Q9UQG0 969 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 OR10H1Q9Y4A9 318 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 PCDHGB6Q9Y5F9 930 aa11.26□□□□□ -0.61
DDX55-210ENST00000543016 CELSR3Q9NYQ7 3312 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 TRAV17A0A0B4J275 112 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 A8MVJ9 347 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 TP53I11O14683 189 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 NADKO95544 446 aaPredicted RBP11.25□□□□□ -0.61
DDX55-210ENST00000543016 WDPCPO95876 746 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 GUSBP08236 651 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 FBXO45P0C2W1 286 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 FAM87AP0C7U9 286 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 MATN1P21941 496 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 PTPN6P29350 595 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 GABRA3P34903 492 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 KRT20P35900 424 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 MNAT1P51948 309 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 FADDQ13158 208 aa11.25□□□□□ -0.61
DDX55-210ENST00000543016 RAPSNQ13702 412 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms