RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 OR6C74A6NCV1 312 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 ZNF705EA8MWA4 302 aaPredicted RBP12.47□□□□□ -0.41
TNC-212ENST00000542877 ZNF791Q3KP31 576 aaPredicted RBP12.47□□□□□ -0.41
TNC-212ENST00000542877 BEND4Q6ZU67 534 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 SERPINA11Q86U17 422 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 IGFN1Q86VF2 1251 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 OR8K5Q8NH50 307 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 CD200R1Q8TD46 325 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 SGIP1Q9BQI5 828 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 CLDND1Q9NY35 253 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 BACE2Q9Y5Z0 518 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 TCRBV3S1A0A5B6 114 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 SMCO3A2RU48 225 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 FAM221BA6H8Z2 402 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 RPS17P08708 135 aaKnown RBP12.47□□□□□ -0.41
TNC-212ENST00000542877 S100PP25815 95 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 DCP2Q8IU60 420 aaKnown RBP12.47□□□□□ -0.41
TNC-212ENST00000542877 NRMQ8IXM6 262 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 SPARTQ8N0X7 666 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 FTMTQ8N4E7 242 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 ADAMTS18Q8TE60 1221 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 ACTRT3Q9BYD9 372 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 GORASP2Q9H8Y8 452 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 C2orf78A6NCI8 922 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 NPIPA2E9PIF3 369 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 NPIPA3F8WFD2 350 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 KCNJ13O60928 360 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 SGCAQ16586 387 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 UAP1L1Q3KQV9 507 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 PLAG1Q6DJT9 500 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 CYP4V2Q6ZWL3 525 aaPredicted RBP12.47□□□□□ -0.41
TNC-212ENST00000542877 CBARPQ8N350 705 aaPredicted RBP12.47□□□□□ -0.41
TNC-212ENST00000542877 BOCQ9BWV1 1114 aa12.47□□□□□ -0.41
TNC-212ENST00000542877 TMEM121BQ9BXQ6 578 aaPredicted RBP12.47□□□□□ -0.41
TNC-212ENST00000542877 EIF5A2Q9GZV4 153 aaKnown RBP12.47□□□□□ -0.41
TNC-212ENST00000542877 KRBA1A5PL33 1030 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 AXIN1O15169 862 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 DNAJB6O75190 326 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 APBB3O95704 486 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 PAHP00439 452 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 MAS1P04201 325 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 RHOP08100 348 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 PITPNBP48739 271 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 NKX2-5P52952 324 aaPredicted RBP12.46□□□□□ -0.41
TNC-212ENST00000542877 LRP8Q14114 963 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 LAS2Q8IYD9 372 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 CSNK1A1LQ8N752 337 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 CRYGNQ8WXF5 182 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 BMFQ96LC9 184 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 ZNF300Q96RE9 604 aaPredicted RBP12.46□□□□□ -0.41
TNC-212ENST00000542877 SYT11Q9BT88 431 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 CEPT1Q9Y6K0 416 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 CD34P28906 385 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 HOXA11P31270 313 aaPredicted RBP12.46□□□□□ -0.41
TNC-212ENST00000542877 UQCRC1P31930 480 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 CDKN2CP42773 168 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 AAK1Q2M2I8 961 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 BCL2L15Q5TBC7 163 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 ZNF551Q7Z340 670 aaPredicted RBP12.46□□□□□ -0.41
TNC-212ENST00000542877 TRMT10AQ8TBZ6 339 aaKnown RBP12.46□□□□□ -0.41
TNC-212ENST00000542877 PGAM5Q96HS1 289 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 SHDQ96IW2 340 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 MRPL15Q9P015 296 aaKnown RBP12.46□□□□□ -0.41
TNC-212ENST00000542877 COL14A1Q05707 1796 aaKnown RBP12.46□□□□□ -0.41
TNC-212ENST00000542877 NAP1L6A6NFF2 107 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 K7ERQ8 282 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 RNASET2O00584 256 aaKnown RBP12.46□□□□□ -0.41
TNC-212ENST00000542877 SCO2O43819 266 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 IFNA1P01562 189 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 GGT2P36268 569 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 NOVP48745 357 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 WNT7BP56706 349 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 GBX1Q14549 363 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 CRTC1Q6UUV9 634 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 MAMDC4Q6UXC1 1216 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 KLHDC8AQ8IYD2 350 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 HAVCR2Q8TDQ0 301 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 CNOT9Q92600 299 aaKnown RBP12.46□□□□□ -0.41
TNC-212ENST00000542877 ZNF486Q96H40 463 aaPredicted RBP12.46□□□□□ -0.41
TNC-212ENST00000542877 MSLNLQ96KJ4 702 aa12.46□□□□□ -0.41
TNC-212ENST00000542877 CDC123O75794 336 aaPredicted RBP12.46□□□□□ -0.42
TNC-212ENST00000542877 HNRNPA1P09651 372 aaKnown RBP eCLIP12.46□□□□□ -0.42
TNC-212ENST00000542877 PRSS56P0CW18 603 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 CXCR4P61073 352 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 FAM189BP81408 668 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 ZNF789Q5FWF6 425 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 SLC18B1Q6NT16 456 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 KDELC1Q6UW63 502 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 LARP4Q71RC2 724 aaKnown RBP eCLIP12.46□□□□□ -0.42
TNC-212ENST00000542877 ZER1Q7Z7L7 766 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 FAM217AQ8IXS0 508 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 TCEAL3Q969E4 200 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 PBDC1Q9BVG4 233 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 RDH14Q9HBH5 336 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 EMC3Q9P0I2 261 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 GPR52Q9Y2T5 361 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 GOLGA4Q13439 2230 aaKnown RBP12.46□□□□□ -0.42
TNC-212ENST00000542877 LRRC37A3O60309 1634 aa12.46□□□□□ -0.42
TNC-212ENST00000542877 LOC285095A0A1B0GVY8 99 aa12.45□□□□□ -0.42
TNC-212ENST00000542877 ITGAMP11215 1152 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms