RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 GULP1Q9UBP9 304 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 DIMT1Q9UNQ2 313 aaKnown RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 COLQQ9Y215 455 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 PRKAB1Q9Y478 270 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 CDH10Q9Y6N8 788 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 TET1Q8NFU7 2136 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ATP6V1G2-DDX39BF2Z307 99 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 RNGTTO60942 597 aaKnown RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 KLK1P06870 262 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 DDX6P26196 483 aaKnown RBP eCLIP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 STOMP27105 288 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 PBLDP30039 288 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 BDKRB1P46663 353 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 CSNK1DP48730 415 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 DGKGP49619 791 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ATP12AP54707 1039 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 AP1S1P61966 158 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 RPL6Q02878 288 aaKnown RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 GALEQ14376 348 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 TEAD2Q15562 447 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 SYT14P1Q58G82 188 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 CDKL4Q5MAI5 379 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ZNF770Q6IQ21 691 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 REEP3Q6NUK4 255 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 CRTC1Q6UUV9 634 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 RSPO2Q6UXX9 243 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 RTL10Q7L3V2 364 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 CHMP1BQ7LBR1 199 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ADGRD2Q7Z7M1 963 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 APCDD1Q8J025 514 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 MMP21Q8N119 569 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ZNF655Q8N720 491 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 TOR1AIP2Q8NFQ8 470 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 BEST4Q8NFU0 473 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 WDR48Q8TAF3 677 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 OVCA2Q8WZ82 227 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 NXPE3Q969Y0 559 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 OTUB1Q96FW1 271 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ZC3HAV1LQ96H79 300 aaKnown RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ZNF582Q96NG8 517 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ATF6BQ99941 703 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 BHLHE41Q9C0J9 482 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 MVB12BQ9H7P6 319 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 FOLH1BQ9HBA9 442 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 RC3H2Q9HBD1 1191 aaKnown RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 MIEF1Q9NQG6 463 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 NUDT15Q9NV35 164 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 RDH8Q9NYR8 311 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ADAM30Q9UKF2 790 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 EXO1Q9UQ84 846 aaKnown RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 SLC9A8Q9Y2E8 581 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 AP1M2Q9Y6Q5 423 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 PTPRDP23468 1912 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 LINC00862A6NCI5 91 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ZNF840PA6NDX5 716 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 EEF1E1O43324 174 aaKnown RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 CHP2O43745 196 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 LANCL1O43813 399 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 GPR37L1O60883 481 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ABLIM3O94929 683 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 CH25HO95992 272 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 RAF1P04049 648 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 EPHX1P07099 455 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ARAFP10398 606 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ELK1P19419 428 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 TALDO1P37837 337 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 SRP9P49458 86 aaKnown RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 AP1S2P56377 157 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 LSM11P83369 360 aaKnown RBP eCLIP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ZNF763Q0D2J5 394 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 SNTA1Q13424 505 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 MRPL58Q14197 206 aaKnown RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ZSWIM7Q19AV6 140 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 SYTL3Q4VX76 610 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 SPIN4Q56A73 249 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 CLEC12AQ5QGZ9 265 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 C6orf132Q5T0Z8 1188 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 C12orf73Q69YU5 71 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 TCTN3Q6NUS6 607 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 PGBD2Q6P3X8 592 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 BHLHB9Q6PI77 547 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 QSOX2Q6ZRP7 698 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 COMMD6Q7Z4G1 85 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 IQCHQ86VS3 1027 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 OR11H4Q8NGC9 324 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 WFDC5Q8TCV5 224 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 SP7Q8TDD2 431 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 SENP5Q96HI0 755 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 FCRL1Q96LA6 429 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 TEFMQ96QE5 360 aaKnown RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 SPNS1Q9H2V7 528 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 PIGUQ9H490 435 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 TMEM38AQ9H6F2 299 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 RANBP3Q9H6Z4 567 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 TDP1Q9NUW8 608 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 TAS2R7Q9NYW3 318 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 PTGFRNQ9P2B2 879 aa5.02□□□□□ -1.61
KDM3B-209ENST00000542866 ELF5Q9UKW6 265 aaPredicted RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 MRPS7Q9Y2R9 242 aaKnown RBP5.02□□□□□ -1.61
KDM3B-209ENST00000542866 IRAK3Q9Y616 596 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms