RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 PRRC1Q96M27 445 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF582Q96NG8 517 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 AMDHD1Q96NU7 426 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 NRTNQ99748 197 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 GPA33Q99795 319 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 DPH7Q9BTV6 452 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 ACAT2Q9BWD1 397 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 HDAC8Q9BY41 377 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 GSX2Q9BZM3 304 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 POLR2J2Q9GZM3 115 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 AICDAQ9GZX7 198 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 MIXL1Q9H2W2 232 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 TMEM245Q9H330 911 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 OR51I1Q9H343 314 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 GLIPR2Q9H4G4 154 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 DZANK1Q9NVP4 752 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 C14orf119Q9NWQ9 140 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 TXNL4BQ9NX01 149 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 TEX10Q9NXF1 929 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 C5AR2Q9P296 337 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 SEC14L3Q9UDX4 400 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 PLEKHB1Q9UF11 243 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 FBXW2Q9UKT8 454 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 SSR3Q9UNL2 185 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 TMEM98Q9Y2Y6 226 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 SF3B6Q9Y3B4 125 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 CMAHPQ9Y471 501 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 IGKV1-8A0A0C4DH67 115 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 A0A0G2JPF8 293 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TMEM129A0AVI4 362 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 FEZF1A0PJY2 475 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 IRGMA1A4Y4 181 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 LRIT2A6NDA9 550 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 A8MU76 341 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 KDM4EB2RXH2 506 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 HNRNPCL2B2RXH8 293 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 HNRNPCL3B7ZW38 293 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 H3BN98 237 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 H7BY64 318 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 M0R3H8 397 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 WWP2O00308 870 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SYT5O00445 386 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 MAN2B1O00754 1011 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PLD2O14939 933 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CASC3O15234 703 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TLX2O43763 284 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 LCMT2O60294 686 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 NME6O75414 186 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CCNKO75909 580 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CHRM4P08173 479 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 HNRNPCL4P0DMR1 293 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ACP2P11117 423 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 IL7P13232 177 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CEBPBP17676 345 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TNNI3P19429 210 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 GSTM3P21266 225 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 DDOSTP39656 456 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ETV5P41161 510 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 NR4A2P43354 598 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 RPS5P46782 204 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 KHKP50053 298 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ETV1P50549 477 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ARFIP1P53367 373 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CSNK1G2P78368 415 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 DMPKQ09013 629 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 FUT5Q11128 374 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 RAB40BQ12829 278 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 HYAL2Q12891 473 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ASAH1Q13510 395 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 C1DQ13901 141 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 GINS1Q14691 196 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 SF3B4Q15427 424 aaKnown RBP eCLIP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PLK5Q496M5 336 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TMEM35AQ53FP2 167 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 KLHL22Q53GT1 634 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CCDC92Q53HC0 331 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 NXNL2Q5VZ03 156 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 OR4C11Q6IEV9 310 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 MRM1Q6IN84 353 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ACSM5Q6NUN0 579 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 XKRXQ6PP77 449 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CD200R1LQ6Q8B3 271 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 HSDL2Q6YN16 418 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 LRRTM4Q86VH4 590 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 KIF18BQ86Y91 864 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 MMAAQ8IVH4 418 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 LAX1Q8IWV1 398 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 IQCF1Q8N6M8 205 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 LINC01555Q8NAE3 123 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 OR6T1Q8NGN1 323 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 OR9Q1Q8NGQ5 310 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 NR4A3Q92570 626 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 RAB7BQ96AH8 199 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 KIAA1143Q96AT1 154 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 EXOSC8Q96B26 276 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TRIM43Q96BQ3 446 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ST6GAL2Q96JF0 529 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PRAP1Q96NZ9 151 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 NECAB3Q96P71 396 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms