RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 LRRC3CA6NJW4 275 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 B4DXG7 233 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 ANKRD28O15084 1053 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 SCAMP2O15127 329 aaKnown RBP8.93□□□□□ -0.98
YBX3-212ENST00000542002 UGT2B11O75310 529 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 TRIM3O75382 744 aaPredicted RBP8.93□□□□□ -0.98
YBX3-212ENST00000542002 PPM1BO75688 479 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 BCAS2O75934 225 aaPredicted RBP8.93□□□□□ -0.98
YBX3-212ENST00000542002 AGFG2O95081 481 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 LDLRP01130 860 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 P04436 131 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 KITP10721 976 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 PRPS2P11908 318 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 PTGDSP41222 190 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 CASP3P42574 277 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 MAGEA5P43359 124 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 CDK9P50750 372 aaKnown RBP8.93□□□□□ -0.98
YBX3-212ENST00000542002 PHC1P78364 1004 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 HSPB3Q12988 150 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 GAB1Q13480 694 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 ELOAQ14241 798 aaKnown RBP8.93□□□□□ -0.98
YBX3-212ENST00000542002 C3AR1Q16581 482 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 HYAL4Q2M3T9 481 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 C6orf163Q5TEZ5 329 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 SPPL2CQ8IUH8 684 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 WDR75Q8IWA0 830 aaKnown RBP8.93□□□□□ -0.98
YBX3-212ENST00000542002 FBXW8Q8N3Y1 598 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 POGLUT1Q8NBL1 392 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 FAM98AQ8NCA5 519 aaKnown RBP8.93□□□□□ -0.98
YBX3-212ENST00000542002 TMBIM1Q969X1 311 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 RELTQ969Z4 430 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 COQ8BQ96D53 544 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 OMA1Q96E52 524 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 HSPBAP1Q96EW2 488 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 GIMAP5Q96F15 307 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 C16orf58Q96GQ5 468 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 ANGPTL4Q9BY76 406 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 WDR55Q9H6Y2 383 aaPredicted RBP8.93□□□□□ -0.98
YBX3-212ENST00000542002 ZDHHC11Q9H8X9 412 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 VIPAS39Q9H9C1 493 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 IL1RL2Q9HB29 575 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 SIRT3Q9NTG7 399 aaPredicted RBP8.93□□□□□ -0.98
YBX3-212ENST00000542002 NKIRAS1Q9NYS0 192 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 CNIH4Q9P003 139 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 NTMQ9P121 344 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 MARCOQ9UEW3 520 aaPredicted RBP8.93□□□□□ -0.98
YBX3-212ENST00000542002 PRODH2Q9UF12 536 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 LIPGQ9Y5X9 500 aa8.93□□□□□ -0.98
YBX3-212ENST00000542002 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.93□□□□□ -0.98
YBX3-212ENST00000542002 ANKRD33BA6NCL7 494 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 C17orf51A8MQB3 221 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 SDHDO14521 159 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 ADAM10O14672 748 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 TFECO14948 347 aaPredicted RBP8.92□□□□□ -0.98
YBX3-212ENST00000542002 ACOX3O15254 700 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 PDPK1O15530 556 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 TSPAN2O60636 221 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 SLC19A2O60779 497 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 ERN1O75460 977 aaKnown RBP8.92□□□□□ -0.98
YBX3-212ENST00000542002 SNUPNO95149 360 aaKnown RBP8.92□□□□□ -0.98
YBX3-212ENST00000542002 ALDOCP09972 364 aaKnown RBP8.92□□□□□ -0.98
YBX3-212ENST00000542002 NAGAP17050 411 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 NTSP30990 170 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 MAP3K8P41279 467 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 ASMTP46597 345 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 MANFP55145 182 aaKnown RBP8.92□□□□□ -0.98
YBX3-212ENST00000542002 WNT3P56703 355 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 CLDN8P56748 225 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 NRG3P56975 720 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 C21orf58P58505 322 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 DCAF7P61962 342 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 RPS6KA2Q15349 733 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 C4orf17Q53FE4 359 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 CPTPQ5TA50 214 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 Q6ZPB1 254 aaPredicted RBP8.92□□□□□ -0.98
YBX3-212ENST00000542002 FJX1Q86VR8 437 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 DOLPP1Q86YN1 238 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 SLC44A2Q8IWA5 706 aaPredicted RBP8.92□□□□□ -0.98
YBX3-212ENST00000542002 HOMEZQ8IX15 550 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 DND1Q8IYX4 353 aaKnown RBP8.92□□□□□ -0.98
YBX3-212ENST00000542002 DIO2Q92813 273 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 HOXB13Q92826 284 aaPredicted RBP8.92□□□□□ -0.98
YBX3-212ENST00000542002 MTERF3Q96E29 417 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 TEX37Q96LM6 180 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 RILPQ96NA2 401 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 GNRHR2Q96P88 292 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 ADOQ96SZ5 270 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 GALNT9Q9HCQ5 603 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 ZFP64Q9NPA5 681 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 ACSS1Q9NUB1 689 aaPredicted RBP8.92□□□□□ -0.98
YBX3-212ENST00000542002 ASIC5Q9NY37 505 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 TAS2R9Q9NYW1 312 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 FLRT3Q9NZU0 649 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 TNFRSF10DQ9UBN6 386 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 TINAGQ9UJW2 476 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 EIF3LQ9Y262 564 aaKnown RBP8.92□□□□□ -0.98
YBX3-212ENST00000542002 CFL2Q9Y281 166 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 SLC5A6Q9Y289 635 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 BOLA1Q9Y3E2 137 aa8.92□□□□□ -0.98
YBX3-212ENST00000542002 TRGV8A0A0C4DH27 118 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms