RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 OGFRL1Q5TC84 451 aaPredicted RBP25.91■■□□□ 1.74
CCM2-218ENST00000541586 CCDC80Q76M96 950 aa25.91■■□□□ 1.74
CCM2-218ENST00000541586 SLC30A8Q8IWU4 369 aa25.91■■□□□ 1.74
CCM2-218ENST00000541586 SIMC1Q8NDZ2 872 aa25.91■■□□□ 1.74
CCM2-218ENST00000541586 STT3BQ8TCJ2 826 aa25.91■■□□□ 1.74
CCM2-218ENST00000541586 ZNF675Q8TD23 568 aa25.91■■□□□ 1.74
CCM2-218ENST00000541586 DOK4Q8TEW6 326 aa25.91■■□□□ 1.74
CCM2-218ENST00000541586 OTUB1Q96FW1 271 aaPredicted RBP25.91■■□□□ 1.74
CCM2-218ENST00000541586 SOX17Q9H6I2 414 aaPredicted RBP25.91■■□□□ 1.74
CCM2-218ENST00000541586 MAT2BQ9NZL9 334 aa25.91■■□□□ 1.74
CCM2-218ENST00000541586 CLDN16Q9Y5I7 305 aa25.91■■□□□ 1.74
CCM2-218ENST00000541586 OR10H2O60403 315 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 SLITRK5O94991 958 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 BCHEP06276 602 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 FCGR1AP12314 374 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 HSD17B7P56937 341 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 MGAT2Q10469 447 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 NCF4Q15080 339 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 FHL5Q5TD97 284 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 REEP3Q6NUK4 255 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 EIF3MQ7L2H7 374 aaKnown RBP25.9■■□□□ 1.74
CCM2-218ENST00000541586 XAGE5Q8WWM1 108 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 MS4A4EQ96PG1 132 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 MAGIXQ9H6Y5 334 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 MKKSQ9NPJ1 570 aaPredicted RBP25.9■■□□□ 1.74
CCM2-218ENST00000541586 LANCL2Q9NS86 450 aa25.9■■□□□ 1.74
CCM2-218ENST00000541586 FARSAQ9Y285 508 aaKnown RBP25.9■■□□□ 1.74
CCM2-218ENST00000541586 ONECUT2O95948 504 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 MAOAP21397 527 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 F8A1P23610 371 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 ANXA11P50995 505 aaKnown RBP25.89■■□□□ 1.74
CCM2-218ENST00000541586 PCBP3P57721 371 aaKnown RBP25.89■■□□□ 1.74
CCM2-218ENST00000541586 RPS15P62841 145 aaKnown RBP25.89■■□□□ 1.74
CCM2-218ENST00000541586 MAPK11Q15759 364 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 MRPL14Q6P1L8 145 aaKnown RBP25.89■■□□□ 1.74
CCM2-218ENST00000541586 DGAT2L6Q6ZPD8 337 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 VASH2Q86V25 355 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 LAPTM4BQ86VI4 370 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 TMEM151BQ8IW70 566 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 SLC44A2Q8IWA5 706 aaPredicted RBP25.89■■□□□ 1.74
CCM2-218ENST00000541586 ZNF248Q8NDW4 579 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 KCNE4Q8WWG9 221 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 TMEM19Q96HH6 336 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 OR1F2PQ96R84 312 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 ALOXE3Q9BYJ1 711 aa25.89■■□□□ 1.74
CCM2-218ENST00000541586 C19orf53Q9UNZ5 99 aaPredicted RBP25.89■■□□□ 1.74
CCM2-218ENST00000541586 A0A087WV62 115 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 PRAMEF27A3QJZ7 478 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 C5orf58C9J3I9 102 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 PLOD3O60568 738 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 CNOT3O75175 753 aaKnown RBP25.88■■□□□ 1.73
CCM2-218ENST00000541586 NME6O75414 186 aaPredicted RBP25.88■■□□□ 1.73
CCM2-218ENST00000541586 BMP10O95393 424 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 ALBP02768 609 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 CT62P0C5K7 136 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 ZGLP1P0C6A0 271 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 MAN2A2P49641 1150 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 RPS18P62269 152 aaKnown RBP25.88■■□□□ 1.73
CCM2-218ENST00000541586 CLN3Q13286 438 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 DNASE1L3Q13609 305 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 MINDY4Q4G0A6 757 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 CYBRD1Q53TN4 286 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 MED25Q71SY5 747 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 ST13P4Q8IZP2 240 aaPredicted RBP25.88■■□□□ 1.73
CCM2-218ENST00000541586 GPN2Q9H9Y4 310 aaPredicted RBP25.88■■□□□ 1.73
CCM2-218ENST00000541586 P2RX2Q9UBL9 471 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 IFI6P09912 130 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 CRB2Q5IJ48 1285 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 MFSD12Q6NUT3 480 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 UNQ6494/PRO21346Q6UXR6 183 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 LGI4Q8N135 537 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 KIAA1143Q96AT1 154 aaPredicted RBP25.88■■□□□ 1.73
CCM2-218ENST00000541586 CTHRC1Q96CG8 243 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 OR7D2Q96RA2 312 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 ACTRT3Q9BYD9 372 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 ADPRHL2Q9NX46 363 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 PTRH2Q9Y3E5 179 aaKnown RBP25.88■■□□□ 1.73
CCM2-218ENST00000541586 MRPS18BQ9Y676 258 aaKnown RBP25.88■■□□□ 1.73
CCM2-218ENST00000541586 CCDC88CQ9P219 2028 aa25.88■■□□□ 1.73
CCM2-218ENST00000541586 KLK10O43240 276 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 CAPNS1P04632 268 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 CLCN2P51788 898 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 TXNL4AP83876 142 aaKnown RBP25.87■■□□□ 1.73
CCM2-218ENST00000541586 SRSF6Q13247 344 aaKnown RBP25.87■■□□□ 1.73
CCM2-218ENST00000541586 SYPL1Q16563 259 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 RPS26P11Q5JNZ5 115 aaPredicted RBP25.87■■□□□ 1.73
CCM2-218ENST00000541586 VTCN1Q7Z7D3 282 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 KBTBD2Q8IY47 623 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 FKBP10Q96AY3 582 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 TAMM41Q96BW9 452 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 RBM18Q96H35 190 aaKnown RBP25.87■■□□□ 1.73
CCM2-218ENST00000541586 HSH2DQ96JZ2 352 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 DCBLD2Q96PD2 775 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 KLHL4Q9C0H6 718 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 VCX3BQ9H321 246 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 YY1AP1Q9H869 796 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 DKK4Q9UBT3 224 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 IL17BQ9UHF5 180 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 ZFHX4Q86UP3 3567 aa25.87■■□□□ 1.73
CCM2-218ENST00000541586 TMEM247A6NEH6 219 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms