RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 C6orf47O95873 294 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 CRYABP02511 175 aaKnown RBP17.33■□□□□ 0.36
VPS33A-205ENST00000541169 NCF2P19878 526 aaPredicted RBP17.33■□□□□ 0.36
VPS33A-205ENST00000541169 NME2P22392 152 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 ADSLP30566 484 aaPredicted RBP17.33■□□□□ 0.36
VPS33A-205ENST00000541169 CDK9P50750 372 aaKnown RBP17.33■□□□□ 0.36
VPS33A-205ENST00000541169 WNT3P56703 355 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 KCNK10P57789 538 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 HBA1P69905 142 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 ZNF155Q12901 538 aaPredicted RBP17.33■□□□□ 0.36
VPS33A-205ENST00000541169 DUSP8Q13202 625 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 TP53BP2Q13625 1128 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 NTRK2Q16620 822 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 IL20RBQ6UXL0 311 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 NUP54Q7Z3B4 507 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 SLC34A3Q8N130 599 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 ZNF843Q8N446 348 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 POGLUT1Q8NBL1 392 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 CATSPER1Q8NEC5 780 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 OR4A15Q8NGL6 344 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 DNAJB8Q8NHS0 232 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 FAM120BQ96EK7 910 aaKnown RBP17.33■□□□□ 0.36
VPS33A-205ENST00000541169 TEX37Q96LM6 180 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 MFRPQ9BY79 579 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 NXF5Q9H1B4 397 aaKnown RBP17.33■□□□□ 0.36
VPS33A-205ENST00000541169 LIN28AQ9H9Z2 209 aaKnown RBP17.33■□□□□ 0.36
VPS33A-205ENST00000541169 HHATLQ9HCP6 504 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 SIRT3Q9NTG7 399 aaPredicted RBP17.33■□□□□ 0.36
VPS33A-205ENST00000541169 FAF1Q9UNN5 650 aaPredicted RBP17.33■□□□□ 0.36
VPS33A-205ENST00000541169 OR10H1Q9Y4A9 318 aa17.33■□□□□ 0.36
VPS33A-205ENST00000541169 ZFYVE26Q68DK2 2539 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 GMNCA6NCL1 334 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 ANKRD33BA6NCL7 494 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 DUXAA6NLW8 204 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 PPM1BO75688 479 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 OR6B1O95007 311 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 RASAL1O95294 804 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 P04436 131 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 CT45A8P0DMV1 189 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 CT45A9P0DMV2 189 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 UQCRC2P22695 453 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 ABCD3P28288 659 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 LCN1P31025 176 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 LSP1P33241 339 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 PTGER1P34995 402 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 ANXA11P50995 505 aaKnown RBP17.32■□□□□ 0.36
VPS33A-205ENST00000541169 NME5P56597 212 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 RCAN2Q14206 197 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 CT45A2Q5DJT8 189 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 SLC22A10Q63ZE4 541 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 SPINK14Q6IE38 97 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 TMEM81Q6P7N7 255 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 AMER2Q8N7J2 671 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 PSD4Q8NDX1 1056 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 ITCHQ96J02 903 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 MAGED4Q96JG8 741 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 SIGLEC12Q96PQ1 595 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 PANX1Q96RD7 426 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 STACQ99469 402 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 DUSP22Q9NRW4 184 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 AGPAT4Q9NRZ5 378 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 SACM1LQ9NTJ5 587 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 ANKRD10Q9NXR5 420 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 COPG1Q9Y678 874 aaKnown RBP17.32■□□□□ 0.36
VPS33A-205ENST00000541169 CNTRLQ7Z7A1 2325 aa17.32■□□□□ 0.36
VPS33A-205ENST00000541169 SPTA1P02549 2419 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 OR6C70A6NIJ9 312 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 TTLL8A6PVC2 850 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 SLC22A2O15244 555 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 KCNH1O95259 989 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 AGR2O95994 175 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 ALOX5P09917 674 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 ZCCHC18P0CG32 403 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 IL12AP29459 219 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 TRPC1P48995 793 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 PNLIPRP2P54317 469 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 PRKAG1P54619 331 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 PSG6Q00889 435 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 PLCXD2Q0VAA5 305 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 SNTA1Q13424 505 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 EFR3AQ14156 821 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 DECR1Q16698 335 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 ZNF468Q5VIY5 522 aaPredicted RBP17.31■□□□□ 0.36
VPS33A-205ENST00000541169 MFSD12Q6NUT3 480 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 BLOC1S3Q6QNY0 202 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 SZRD1Q7Z422 152 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 SLC44A2Q8IWA5 706 aaPredicted RBP17.31■□□□□ 0.36
VPS33A-205ENST00000541169 CPSF7Q8N684 471 aaKnown RBP17.31■□□□□ 0.36
VPS33A-205ENST00000541169 PAQR8Q8TEZ7 354 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 TMCO6Q96DC7 493 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 THOC1Q96FV9 657 aaKnown RBP17.31■□□□□ 0.36
VPS33A-205ENST00000541169 MARK4Q96L34 752 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 ACTRT3Q9BYD9 372 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 VPS4AQ9UN37 437 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 DTX4Q9Y2E6 619 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 CSAG2Q9Y5P2 127 aa17.31■□□□□ 0.36
VPS33A-205ENST00000541169 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 CCDC154A6NI56 674 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 RFXANKO14593 260 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 NKX2-2O95096 273 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms