RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 TAS2R9Q9NYW1 312 aa12.05□□□□□ -0.48
LTBR-208ENST00000541005 GIMAP2Q9UG22 337 aa12.05□□□□□ -0.48
LTBR-208ENST00000541005 BAIAP2L1Q9UHR4 511 aa12.05□□□□□ -0.48
LTBR-208ENST00000541005 ATP6V1HQ9UI12 483 aa12.05□□□□□ -0.48
LTBR-208ENST00000541005 C19orf53Q9UNZ5 99 aaPredicted RBP12.05□□□□□ -0.48
LTBR-208ENST00000541005 LRRC3CA6NJW4 275 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 G3V3Y1 287 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 SCAMP2O15127 329 aaKnown RBP12.04□□□□□ -0.48
LTBR-208ENST00000541005 LRRTM2O43300 516 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 HS6ST1O60243 411 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 PEX11AO75192 247 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 SNNO75324 88 aaPredicted RBP12.04□□□□□ -0.48
LTBR-208ENST00000541005 ERN1O75460 977 aaKnown RBP12.04□□□□□ -0.48
LTBR-208ENST00000541005 PRPS2P11908 318 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 PIGAP37287 484 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 RPL3P39023 403 aaKnown RBP12.04□□□□□ -0.48
LTBR-208ENST00000541005 PER3P56645 1201 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 PPIAP62937 165 aaKnown RBP12.04□□□□□ -0.48
LTBR-208ENST00000541005 RPP38P78345 283 aaKnown RBP12.04□□□□□ -0.48
LTBR-208ENST00000541005 MAD2L1Q13257 205 aaPredicted RBP12.04□□□□□ -0.48
LTBR-208ENST00000541005 STX3Q13277 289 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 NNATQ16517 81 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 ZNF385BQ569K4 471 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 TMEM107Q6UX40 140 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 FGD2Q7Z6J4 655 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 SPPL2CQ8IUH8 684 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 SLC34A3Q8N130 599 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 LIX1Q8N485 282 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 TMEM251Q8N6I4 163 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 OR52N2Q8NGI0 321 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 CLHC1Q8NHS4 586 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 ZFP28Q8NHY6 868 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 GFM2Q969S9 779 aaKnown RBP12.04□□□□□ -0.48
LTBR-208ENST00000541005 TUBGCP3Q96CW5 907 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 OMA1Q96E52 524 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 ELP4Q96EB1 424 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 ZBED6CLQ96FA7 236 aaPredicted RBP12.04□□□□□ -0.48
LTBR-208ENST00000541005 SLC35A4Q96G79 324 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 ZNF703Q9H7S9 590 aaPredicted RBP12.04□□□□□ -0.48
LTBR-208ENST00000541005 FOLH1BQ9HBA9 442 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 NKIRAS1Q9NYS0 192 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 NTMQ9P121 344 aa12.04□□□□□ -0.48
LTBR-208ENST00000541005 BOKQ9UMX3 212 aaPredicted RBP12.04□□□□□ -0.48
LTBR-208ENST00000541005 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.04□□□□□ -0.48
LTBR-208ENST00000541005 OR6C70A6NIJ9 312 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 UPK1AO00322 258 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 AKAP10O43572 662 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 ABCB7O75027 752 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 TRIM3O75382 744 aaPredicted RBP12.03□□□□□ -0.48
LTBR-208ENST00000541005 SNX4O95219 450 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 LRATO95237 230 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 IGHG3P01860 377 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 CORO7P57737 925 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 KCNJ2P63252 427 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 PLGLB1Q02325 96 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 EMX2Q04743 252 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 PLCXD2Q0VAA5 305 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 SNTA1Q13424 505 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 PTGR1Q14914 329 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 MLC1Q15049 377 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 PDCD2Q16342 344 aaPredicted RBP12.03□□□□□ -0.48
LTBR-208ENST00000541005 PRAMEF20Q5VT98 475 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 C1QL3Q5VWW1 255 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 ANKRD26P1Q6NSI1 321 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 ARHGAP11AQ6P4F7 1023 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 NPSR1Q6W5P4 371 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 NUP54Q7Z3B4 507 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 PRR22Q8IZ63 422 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 FNDC5Q8NAU1 212 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 OR5M3Q8NGP4 307 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 RNF138Q8WVD3 245 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 DIO2Q92813 273 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 HOXB13Q92826 284 aaPredicted RBP12.03□□□□□ -0.48
LTBR-208ENST00000541005 HGDQ93099 445 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 CIDECQ96AQ7 238 aaPredicted RBP12.03□□□□□ -0.48
LTBR-208ENST00000541005 ZNF597Q96LX8 424 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 SH3GL2Q99962 352 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 PAIP2Q9BPZ3 127 aaKnown RBP12.03□□□□□ -0.48
LTBR-208ENST00000541005 DOHHQ9BU89 302 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 C1orf50Q9BV19 199 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 ANGPTL4Q9BY76 406 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 VIPAS39Q9H9C1 493 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 ZFP64Q9NPA5 681 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 THAP1Q9NVV9 213 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 ARGLU1Q9NWB6 273 aaPredicted RBP12.03□□□□□ -0.48
LTBR-208ENST00000541005 QPCTLQ9NXS2 382 aa12.03□□□□□ -0.48
LTBR-208ENST00000541005 NOP53Q9NZM5 478 aaKnown RBP12.03□□□□□ -0.48
LTBR-208ENST00000541005 DOCK7Q96N67 2140 aa12.02□□□□□ -0.48
LTBR-208ENST00000541005 PKDREJQ9NTG1 2253 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 A0A1B0GVC2 190 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 TTC36A6NLP5 189 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 FAM166BA8MTA8 275 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 TSPAN2O60636 221 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 PRPS1L1P21108 318 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 CASP3P42574 277 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 MAGEA5P43359 124 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 CASP6P55212 293 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 HSF1Q00613 529 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 PSG6Q00889 435 aa12.02□□□□□ -0.49
LTBR-208ENST00000541005 ZNF155Q12901 538 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms